BLASTX nr result

ID: Angelica23_contig00035661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035661
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ...   105   6e-21
emb|CBI40063.3| unnamed protein product [Vitis vinifera]               93   4e-17
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote...    93   4e-17
ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|2...    89   8e-16
gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidops...    87   2e-15

>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
            gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
            protein, putative [Ricinus communis]
          Length = 781

 Score =  105 bits (263), Expect = 6e-21
 Identities = 62/154 (40%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
 Frame = +2

Query: 155  ESARSFASVDR-ELSAVGDPKFDVSSMSFASVDGELSPIEDQEFDESLMTKEEETNLCEG 331
            +S R+F S +R E+S       D   +    V+ ELSP +  E D ++M +E  ++  EG
Sbjct: 625  KSLRTFESPERPEIS-----NLDRVRLESERVEKELSPSKGHELDLNMMNEEISSD--EG 677

Query: 332  DDKQEKYHWSTRTRAVVQFLHTEFLARKKRGENEVVKLSQAVEGKSKKRNARLFYELLAL 511
            D+ Q +Y WS RTR  V+ LH  FL +K R E EVV L   +EG++KK +ARLFYE+L L
Sbjct: 678  DN-QNQYGWSGRTRVAVRCLHRSFLKQKNRREEEVVNLLSLLEGRAKKESARLFYEILVL 736

Query: 512  TTRGFLNVKQDNPYGDISIVETSKLKESLEGDNM 613
             ++G+++VKQ+N YGDI + + S+  ++   D++
Sbjct: 737  KSKGYVHVKQENAYGDILVWKASQWGQACSEDSV 770


>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 55/139 (39%), Positives = 86/139 (61%)
 Frame = +2

Query: 188 ELSAVGDPKFDVSSMSFASVDGELSPIEDQEFDESLMTKEEETNLCEGDDKQEKYHWSTR 367
           E+  + D    V + SF S     S  E++EFD   +   EE N CE  + Q+   WS R
Sbjct: 482 EVHKLTDSDRVVPASSFESSQQRQSSSENEEFD---ILMNEEINSCEVAN-QKINGWSDR 537

Query: 368 TRAVVQFLHTEFLARKKRGENEVVKLSQAVEGKSKKRNARLFYELLALTTRGFLNVKQDN 547
           T  V ++L   FL +KK+G+   V LSQ + GK+KK ++RLFYE+L L ++G+++V+Q+N
Sbjct: 538 TGMVARYLCRSFLNQKKQGDENAVTLSQFLTGKTKKESSRLFYEILVLKSKGYVDVEQNN 597

Query: 548 PYGDISIVETSKLKESLEG 604
            YGDI +++T ++ ES+ G
Sbjct: 598 AYGDIRVMKTLQM-ESVSG 615


>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
            vinifera]
          Length = 756

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 55/139 (39%), Positives = 86/139 (61%)
 Frame = +2

Query: 188  ELSAVGDPKFDVSSMSFASVDGELSPIEDQEFDESLMTKEEETNLCEGDDKQEKYHWSTR 367
            E+  + D    V + SF S     S  E++EFD   +   EE N CE  + Q+   WS R
Sbjct: 617  EVHKLTDSDRVVPASSFESSQQRQSSSENEEFD---ILMNEEINSCEVAN-QKINGWSDR 672

Query: 368  TRAVVQFLHTEFLARKKRGENEVVKLSQAVEGKSKKRNARLFYELLALTTRGFLNVKQDN 547
            T  V ++L   FL +KK+G+   V LSQ + GK+KK ++RLFYE+L L ++G+++V+Q+N
Sbjct: 673  TGMVARYLCRSFLNQKKQGDENAVTLSQFLTGKTKKESSRLFYEILVLKSKGYVDVEQNN 732

Query: 548  PYGDISIVETSKLKESLEG 604
             YGDI +++T ++ ES+ G
Sbjct: 733  AYGDIRVMKTLQM-ESVSG 750


>ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|222874175|gb|EEF11306.1|
            predicted protein [Populus trichocarpa]
          Length = 770

 Score = 89.0 bits (219), Expect = 8e-16
 Identities = 53/144 (36%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
 Frame = +2

Query: 158  SARSFASVDRELSAVGDPKFDVSSMSFASVDGELSPIEDQEFDESLMTKEEETNL----C 325
            S RSF S +R         +D   +   +V+ E+    DQE D +L+ +     +    C
Sbjct: 630  SVRSFESPERP------DIYDADGLRSKTVEKEICRSLDQELDFNLLNEITTHGILIFVC 683

Query: 326  EGDDKQEKYHWSTRTRAVVQFLHTEFLARKKRGENEVVKLSQAVEGKSKKRNARLFYELL 505
              D       WS RTR  V+ LH  FL +KKR + EV+ L + +EG++K+ +ARLFYE+L
Sbjct: 684  IADG------WSERTRVAVKCLHASFLIQKKRRQEEVLNLLRILEGRTKRESARLFYEIL 737

Query: 506  ALTTRGFLNVKQDNPYGDISIVET 577
             L ++G+++VK++N YGDI I +T
Sbjct: 738  VLKSKGYVDVKEENLYGDILIWKT 761


>gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidopsis thaliana]
          Length = 809

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/106 (42%), Positives = 69/106 (65%)
 Frame = +2

Query: 266  IEDQEFDESLMTKEEETNLCEGDDKQEKYHWSTRTRAVVQFLHTEFLARKKRGENEVVKL 445
            +E+++ D  LM   +E N  E  D Q++  WS+RTR V +FL   FL +++R E E V L
Sbjct: 702  VENRDLDTILMN--DEVNADERQDLQQET-WSSRTRNVAKFLEKTFLEQREREEEEKVSL 758

Query: 446  SQAVEGKSKKRNARLFYELLALTTRGFLNVKQDNPYGDISIVETSK 583
             Q   G+++K +ARLFYE L L T+G+L VKQ++PY D+ ++  S+
Sbjct: 759  LQLCRGRTQKESARLFYETLVLKTKGYLEVKQNHPYSDVFLMRVSR 804


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