BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035604
         (1016 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40152.3| unnamed protein product [Vitis vinifera]              423   e-116
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   423   e-116
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope...   406   e-111
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...   399   e-109
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   395   e-108

>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  423 bits (1087), Expect = e-116
 Identities = 211/337 (62%), Positives = 256/337 (75%), Gaps = 1/337 (0%)
 Frame = -3

Query: 1014 MGYLIDSKSESAISKVVQQVGFLGLQISDRGKFYSKTLVADIASLFRKKYP-SGVNYPSE 838
            +G LIDSKS+SAI+KVVQQ+GFLG Q+S++GKFYS+TLV  +A LF+ KYP  G +YPS 
Sbjct: 741  LGNLIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSG 800

Query: 837  EYGLVRGSLIHGLDPYQXXXXXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVIICYDGT 658
            E+GL+R    HGLDPY+                RGL+EPGTLFKNLMAILRDV+ICYDGT
Sbjct: 801  EFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGT 860

Query: 657  VRNVCSNSIIQFEYGSQTGTLSQSIFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSWA 478
            VRNVCSNSIIQFEYG +  T  Q  F AGEPVGVLAATAMSNPAYKAVLDSSPSSN+SW 
Sbjct: 861  VRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWE 920

Query: 477  MMKEILLCGAKFKNDEVDRRVILYLNGCDCGRKHCGENAAYMVKKQLKRISLKDAAVEFL 298
            +MKEILLC   FKND +DRRVILYLN CDCGRK+C ENAAY+VK QLK+ SLKD AVEF+
Sbjct: 921  LMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFM 980

Query: 297  IEYNSQQTDFSSAQIDAGLVGHFHLDELKMKNSNVSINDILDKCQDTLHKFSKKKKGRVG 118
            IEY  Q     S++   GLVGH HL++L +++ NVS+ ++  KC++T++ F KKK   VG
Sbjct: 981  IEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSFRKKK--NVG 1038

Query: 117  ILFSRIGLSVSQFCSFRQTSESKGCDMPCLKFFWKDN 7
              F +I LS  + C+F+ + +SKG DMPCL FFW+ N
Sbjct: 1039 PFFKKIILSFRECCTFQHSCQSKGSDMPCLLFFWQGN 1075


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  423 bits (1087), Expect = e-116
 Identities = 211/337 (62%), Positives = 256/337 (75%), Gaps = 1/337 (0%)
 Frame = -3

Query: 1014 MGYLIDSKSESAISKVVQQVGFLGLQISDRGKFYSKTLVADIASLFRKKYP-SGVNYPSE 838
            +G LIDSKS+SAI+KVVQQ+GFLG Q+S++GKFYS+TLV  +A LF+ KYP  G +YPS 
Sbjct: 681  LGNLIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSG 740

Query: 837  EYGLVRGSLIHGLDPYQXXXXXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVIICYDGT 658
            E+GL+R    HGLDPY+                RGL+EPGTLFKNLMAILRDV+ICYDGT
Sbjct: 741  EFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGT 800

Query: 657  VRNVCSNSIIQFEYGSQTGTLSQSIFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSWA 478
            VRNVCSNSIIQFEYG +  T  Q  F AGEPVGVLAATAMSNPAYKAVLDSSPSSN+SW 
Sbjct: 801  VRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWE 860

Query: 477  MMKEILLCGAKFKNDEVDRRVILYLNGCDCGRKHCGENAAYMVKKQLKRISLKDAAVEFL 298
            +MKEILLC   FKND +DRRVILYLN CDCGRK+C ENAAY+VK QLK+ SLKD AVEF+
Sbjct: 861  LMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFM 920

Query: 297  IEYNSQQTDFSSAQIDAGLVGHFHLDELKMKNSNVSINDILDKCQDTLHKFSKKKKGRVG 118
            IEY  Q     S++   GLVGH HL++L +++ NVS+ ++  KC++T++ F KKK   VG
Sbjct: 921  IEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCEETINSFRKKK--NVG 978

Query: 117  ILFSRIGLSVSQFCSFRQTSESKGCDMPCLKFFWKDN 7
              F +I LS  + C+F+ + +SKG DMPCL FFW+ N
Sbjct: 979  PFFKKIILSFRECCTFQHSCQSKGSDMPCLLFFWQGN 1015


>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1127

 Score =  406 bits (1044), Expect = e-111
 Identities = 209/335 (62%), Positives = 246/335 (73%)
 Frame = -3

Query: 1014 MGYLIDSKSESAISKVVQQVGFLGLQISDRGKFYSKTLVADIASLFRKKYPSGVNYPSEE 835
            MG LIDSKSESA +KVVQQ+GFLGLQISDRGKFY  TLV D+A LF+KKYPS    PSEE
Sbjct: 233  MGVLIDSKSESAFNKVVQQIGFLGLQISDRGKFYXXTLVHDMAQLFQKKYPSVGTNPSEE 292

Query: 834  YGLVRGSLIHGLDPYQXXXXXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVIICYDGTV 655
            +GLVR  L +GLDPYQ                RGLTEPGTLF NLMAILRDV+ICYDGTV
Sbjct: 293  FGLVRSCLFYGLDPYQGMIHSISSREVIVRSTRGLTEPGTLFXNLMAILRDVVICYDGTV 352

Query: 654  RNVCSNSIIQFEYGSQTGTLSQSIFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSWAM 475
            RNV SNSIIQFEYGS  G+   S F AG+PVGVLAATAMSNPAYKA LDSSPSSN+SW M
Sbjct: 353  RNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVGVLAATAMSNPAYKAXLDSSPSSNSSWEM 412

Query: 474  MKEILLCGAKFKNDEVDRRVILYLNGCDCGRKHCGENAAYMVKKQLKRISLKDAAVEFLI 295
            MKEILLCG  FKND  DRRVILYLN C C R +C E AAY+VK  L ++ LKDAA EFLI
Sbjct: 413  MKEILLCGVSFKNDVSDRRVILYLNDCGCRRGYCREKAAYVVKNHLSKVCLKDAADEFLI 472

Query: 294  EYNSQQTDFSSAQIDAGLVGHFHLDELKMKNSNVSINDILDKCQDTLHKFSKKKKGRVGI 115
            EY  +Q  + +++   GL+GH  L++ +++N  +S+ ++ ++CQ+ +  F  KKK  +G 
Sbjct: 473  EYAGRQAGYENSETGTGLIGHIRLNQGQLENLGISVLEVHERCQENISSFRXKKK--IGN 530

Query: 114  LFSRIGLSVSQFCSFRQTSESKGCDMPCLKFFWKD 10
            LF RI LSVS+FCSF   S SK  + PCL+F W D
Sbjct: 531  LFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFSWPD 565


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score =  399 bits (1024), Expect = e-109
 Identities = 204/337 (60%), Positives = 248/337 (73%)
 Frame = -3

Query: 1014 MGYLIDSKSESAISKVVQQVGFLGLQISDRGKFYSKTLVADIASLFRKKYPSGVNYPSEE 835
            +G +IDS+S+SAI K+VQQ+GFLGLQ+SDR KFYS+ LV D+ASLF +KYP    YPSEE
Sbjct: 482  LGSMIDSRSDSAIDKIVQQIGFLGLQLSDRRKFYSRGLVEDVASLFHQKYPFADVYPSEE 541

Query: 834  YGLVRGSLIHGLDPYQXXXXXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVIICYDGTV 655
            +G V     HGLDPY+                +GL EPGTLFKNLMA+LRDV+ICYDGTV
Sbjct: 542  FGFVSRCFFHGLDPYEEIVHSIATREVIVRSSKGLAEPGTLFKNLMAVLRDVVICYDGTV 601

Query: 654  RNVCSNSIIQFEYGSQTGTLSQSIFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSWAM 475
            RN+ SNS+IQFEYG   G  SQ++F AG+PVGVLAATAMSNPAYKAVLDSSP+SN+SW M
Sbjct: 602  RNISSNSVIQFEYGVG-GMQSQNLFPAGDPVGVLAATAMSNPAYKAVLDSSPNSNSSWDM 660

Query: 474  MKEILLCGAKFKNDEVDRRVILYLNGCDCGRKHCGENAAYMVKKQLKRISLKDAAVEFLI 295
            MKEIL C A F+ND  DRRVILYLN C CGRK+C ENA+ +VK  LK++SL+DAA+E  I
Sbjct: 661  MKEILFCRANFRNDINDRRVILYLNDCCCGRKYCQENASCLVKNHLKKVSLRDAAIELAI 720

Query: 294  EYNSQQTDFSSAQIDAGLVGHFHLDELKMKNSNVSINDILDKCQDTLHKFSKKKKGRVGI 115
            EY   + +  S +IDAGLVGH HL+   +K S + ++DIL KC++ ++   KKKK   G 
Sbjct: 721  EYKRPKLEPESCEIDAGLVGHIHLNSGLLKASGIGMHDILQKCEEQVNLLRKKKK--YGY 778

Query: 114  LFSRIGLSVSQFCSFRQTSESKGCDMPCLKFFWKDNT 4
             F RI LSVS  C F   S+SK  DMPCLKFFW+D T
Sbjct: 779  HFKRILLSVSDCCFFNH-SDSKWTDMPCLKFFWQDMT 814


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  395 bits (1015), Expect = e-108
 Identities = 198/335 (59%), Positives = 248/335 (74%), Gaps = 2/335 (0%)
 Frame = -3

Query: 1014 MGYLIDSKSESAISKVVQQVGFLGLQISDRGKFYSKTLVADIASLFRKKYPSG-VNYPSE 838
            +G L DSKSESAI+KVVQQ+GFLGLQ+SD+G+FYSK+L+ D+ASLF  +Y S  ++YPS 
Sbjct: 681  LGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSA 740

Query: 837  EYGLVRGSLIHGLDPYQXXXXXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVIICYDGT 658
            E+GLV+G   HGLDPY+                RGLTEPGTLFKNLMAILRDV+ICYDGT
Sbjct: 741  EFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGT 800

Query: 657  VRNVCSNSIIQFEYGSQTGTLSQ-SIFAAGEPVGVLAATAMSNPAYKAVLDSSPSSNNSW 481
            VRNVCSNSIIQ EYG + G +   S+F  GEPVGVLAATAMS PAYKAVLDS+PSSN+SW
Sbjct: 801  VRNVCSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSW 860

Query: 480  AMMKEILLCGAKFKNDEVDRRVILYLNGCDCGRKHCGENAAYMVKKQLKRISLKDAAVEF 301
             MMKEILLC   FKN+ +DRRVILYLN C CGRK+C ENAAY+VK  LK+++LKDAA++F
Sbjct: 861  DMMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKSHLKKVTLKDAAMDF 920

Query: 300  LIEYNSQQTDFSSAQIDAGLVGHFHLDELKMKNSNVSINDILDKCQDTLHKFSKKKKGRV 121
            +IEYN Q T    + +  GLVGH HL+ + +K  N+ + ++L +CQ+T+  F KKKK   
Sbjct: 921  MIEYNRQPT---PSGLGPGLVGHVHLNRMLLKELNIDMTEVLRRCQETMSSFKKKKKK-- 975

Query: 120  GILFSRIGLSVSQFCSFRQTSESKGCDMPCLKFFW 16
              +   +  S+S+ C+F Q +  +  DMPCL  FW
Sbjct: 976  --IAHALRFSISEHCAFHQWNGEESIDMPCL-IFW 1007