BLASTX nr result

ID: Angelica23_contig00035579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035579
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06

>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/95 (49%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
 Frame = -2

Query: 273 PPPSFITYVSSTTSAAVPG---ESQFEHTNIS-TKYSQNSQASFKTRQNDAILDIQHSSD 106
           P PS     SS  ++A P    ESQ E T++S T   +     +K RQ+ AIL++Q SSD
Sbjct: 29  PLPSTTRAKSSHLTSATPPLHKESQIEPTHVSVTPRKRCHSVGYKARQS-AILEVQQSSD 87

Query: 105 LGSALARSGGILRVEDLNTILRHFGKSQKLKKLSQ 1
           LGSALAR G +L+V+DLN ILRHFGK  + + LSQ
Sbjct: 88  LGSALARLGDMLKVQDLNVILRHFGKLCRWQDLSQ 122


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Cucumis sativus]
          Length = 668

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
 Frame = -2

Query: 243 STTSAAVPGESQFEHTNISTKYSQNSQA----SFKTRQNDAILDIQHSSDLGSALARSGG 76
           S + A +P E QF   + + K    +Q     S+  RQ+ AI  ++  S+L  ALAR GG
Sbjct: 41  SNSVAILPKEPQFLPGSSNAKLINGAQKRHSKSYLERQS-AIAQVKDCSELAPALARYGG 99

Query: 75  ILRVEDLNTILRHFGKSQKLKKLSQ 1
           +L+ +DLN ILRHFG   + K LSQ
Sbjct: 100 LLKAQDLNVILRHFGMLSRWKDLSQ 124


Top