BLASTX nr result

ID: Angelica23_contig00035512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035512
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26657.3| unnamed protein product [Vitis vinifera]              147   7e-34
ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Viti...   147   7e-34
ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glyc...   140   1e-31
ref|XP_002317341.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-...   139   2e-31

>emb|CBI26657.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/86 (82%), Positives = 81/86 (94%)
 Frame = -3

Query: 260 YHKILDMERAITRDLVSRLQLFSQDLLKAVNFAAELDCFLSLALVARQNNYVRPILTSES 81
           YHKILDMERAITRDLVS + LFS  LLKAV+FAAELDCFLSL+L+A QNNYVRP+L+++S
Sbjct: 459 YHKILDMERAITRDLVSHILLFSMHLLKAVSFAAELDCFLSLSLIAHQNNYVRPVLSADS 518

Query: 80  LLDVRNGRHVLQEMTVETFIPNDTKI 3
           LLD+RNGRHVLQEMTV+TFIPNDTKI
Sbjct: 519 LLDIRNGRHVLQEMTVDTFIPNDTKI 544


>ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Vitis vinifera]
          Length = 807

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/86 (82%), Positives = 81/86 (94%)
 Frame = -3

Query: 260 YHKILDMERAITRDLVSRLQLFSQDLLKAVNFAAELDCFLSLALVARQNNYVRPILTSES 81
           YHKILDMERAITRDLVS + LFS  LLKAV+FAAELDCFLSL+L+A QNNYVRP+L+++S
Sbjct: 473 YHKILDMERAITRDLVSHILLFSMHLLKAVSFAAELDCFLSLSLIAHQNNYVRPVLSADS 532

Query: 80  LLDVRNGRHVLQEMTVETFIPNDTKI 3
           LLD+RNGRHVLQEMTV+TFIPNDTKI
Sbjct: 533 LLDIRNGRHVLQEMTVDTFIPNDTKI 558


>ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glycine max]
          Length = 882

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/86 (79%), Positives = 76/86 (88%)
 Frame = -3

Query: 260 YHKILDMERAITRDLVSRLQLFSQDLLKAVNFAAELDCFLSLALVARQNNYVRPILTSES 81
           +HKILDMERAITRDL SR+ LF   L+K   FAAELDCFLS+ALVARQNNYVRP LT E+
Sbjct: 473 HHKILDMERAITRDLFSRILLFQTHLIKVATFAAELDCFLSMALVARQNNYVRPSLTEEN 532

Query: 80  LLDVRNGRHVLQEMTVETFIPNDTKI 3
           LLD++NGRHVLQEMTV+TFIPNDTKI
Sbjct: 533 LLDIKNGRHVLQEMTVDTFIPNDTKI 558


>ref|XP_002317341.1| predicted protein [Populus trichocarpa] gi|222860406|gb|EEE97953.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score =  140 bits (352), Expect = 1e-31
 Identities = 72/94 (76%), Positives = 79/94 (84%), Gaps = 8/94 (8%)
 Frame = -3

Query: 260 YHKIL--------DMERAITRDLVSRLQLFSQDLLKAVNFAAELDCFLSLALVARQNNYV 105
           YHKIL        DMERAITRDLVS + LFS  LLKA+NFAAELDC LSLA+VA QNNYV
Sbjct: 318 YHKILAVHLLIWKDMERAITRDLVSHVLLFSDHLLKAINFAAELDCILSLAIVAHQNNYV 377

Query: 104 RPILTSESLLDVRNGRHVLQEMTVETFIPNDTKI 3
           RPILT E+LLD++NGRHVLQEMTV+TFIPNDTKI
Sbjct: 378 RPILTEENLLDIQNGRHVLQEMTVDTFIPNDTKI 411


>ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-like [Cucumis sativus]
           gi|449519898|ref|XP_004166971.1| PREDICTED: DNA mismatch
           repair protein MSH5-like [Cucumis sativus]
          Length = 807

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/86 (79%), Positives = 78/86 (90%)
 Frame = -3

Query: 260 YHKILDMERAITRDLVSRLQLFSQDLLKAVNFAAELDCFLSLALVARQNNYVRPILTSES 81
           YHKILDMERAI RDLVS + +FS  L KAV+FAAELDCFLSLAL+ARQNNYVRP LT++S
Sbjct: 473 YHKILDMERAIIRDLVSHILVFSLHLHKAVDFAAELDCFLSLALIARQNNYVRPDLTADS 532

Query: 80  LLDVRNGRHVLQEMTVETFIPNDTKI 3
           +LD++NGRHVLQEM V+TFIPNDTKI
Sbjct: 533 MLDIKNGRHVLQEMAVDTFIPNDTKI 558


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