BLASTX nr result

ID: Angelica23_contig00035483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035483
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511046.1| pentatricopeptide repeat-containing protein,...   153   1e-35
ref|XP_002526480.1| pentatricopeptide repeat-containing protein,...   144   1e-32
ref|XP_002302503.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_003590102.1| hypothetical protein MTR_1g044340 [Medicago ...   142   4e-32
ref|XP_002339511.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32

>ref|XP_002511046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550161|gb|EEF51648.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 360

 Score =  153 bits (387), Expect = 1e-35
 Identities = 69/102 (67%), Positives = 86/102 (84%)
 Frame = -2

Query: 319 SNNRTMALFDSWYSEKDKSKGWKEQDVLVKLMRRGLFQRLGVKARFLDTVYFSGFCQDSR 140
           SNN+T+ LFDSWY+ KD+S G KEQDVL  +MR+G+F+ LG++ RFLDT+YFSGFCQDS 
Sbjct: 243 SNNKTIELFDSWYARKDRSVGQKEQDVLDSMMRQGVFRNLGLRVRFLDTLYFSGFCQDSG 302

Query: 139 DVRLVSTVHANCCRSISAKVADLTTVIHDWKRFLSSIPANET 14
           D+R V+TVHANCCR+ISAK+ADLT V+  WK F +S PANET
Sbjct: 303 DIRAVTTVHANCCRTISAKIADLTAVLRQWKSFKNSPPANET 344


>ref|XP_002526480.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534155|gb|EEF35871.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 357

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/108 (63%), Positives = 85/108 (78%), Gaps = 2/108 (1%)
 Frame = -2

Query: 319 SNNRTMALFDSWYSEKDKSKGWKEQDVLVKLMRRGLFQRLGVKARFLDTVYFSGFCQDSR 140
           SNN+T+ALF++WYS KD S G KEQDVL  LMR G F+RL + ARFLDTVYFSGFC DSR
Sbjct: 234 SNNKTIALFENWYSRKDNSTGKKEQDVLFDLMREGTFRRLELNARFLDTVYFSGFCTDSR 293

Query: 139 DVRLVSTVHANCCRSISAKVADLTTVIHDWKRFLSS--IPANETMPFR 2
           DV+ V+TVHANCCRSISAKV DL +V+ DW R+ ++  +  N T+ F+
Sbjct: 294 DVKAVATVHANCCRSISAKVLDLRSVLRDWMRYKAAKRVATNGTVAFQ 341


>ref|XP_002302503.1| predicted protein [Populus trichocarpa] gi|222844229|gb|EEE81776.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/111 (59%), Positives = 86/111 (77%), Gaps = 6/111 (5%)
 Frame = -2

Query: 319 SNNRTMALFDSWYSEKDKSKGWKEQDVLVKLMRRGLFQRLGVKARFLDTVYFSGFCQDSR 140
           SNN+T++LFD+WY  KD S G KEQDVL  +M+ G+F +LG++ARFLDTVYFSGFC DS+
Sbjct: 183 SNNKTISLFDAWYGRKDNSTGKKEQDVLFDIMKAGMFGQLGLQARFLDTVYFSGFCTDSK 242

Query: 139 DVRLVSTVHANCCRSISAKVADLTTVIHDWKRF------LSSIPANETMPF 5
           D+  V TVHANCCRSI+AKV DLT V+ DWK+F       +++ +N T+PF
Sbjct: 243 DINAVITVHANCCRSINAKVKDLTAVLRDWKKFKATTAKAAAVHSNITVPF 293


>ref|XP_003590102.1| hypothetical protein MTR_1g044340 [Medicago truncatula]
           gi|355479150|gb|AES60353.1| hypothetical protein
           MTR_1g044340 [Medicago truncatula]
          Length = 360

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/103 (63%), Positives = 82/103 (79%)
 Frame = -2

Query: 319 SNNRTMALFDSWYSEKDKSKGWKEQDVLVKLMRRGLFQRLGVKARFLDTVYFSGFCQDSR 140
           SNN+T++LF++WY +KD S G KEQDVL+ L+R G+   LG+K RFLDT+YFSGFCQDS+
Sbjct: 235 SNNKTISLFETWYGKKDNSTGKKEQDVLLDLIRHGIIGHLGLKVRFLDTLYFSGFCQDSK 294

Query: 139 DVRLVSTVHANCCRSISAKVADLTTVIHDWKRFLSSIPANETM 11
           D R V+TVHANCCRSI+AKVADL   +HDWK+F   +  N TM
Sbjct: 295 DFRAVTTVHANCCRSITAKVADLKAALHDWKKF-RRLEVNYTM 336


>ref|XP_002339511.1| predicted protein [Populus trichocarpa] gi|222832587|gb|EEE71064.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/105 (62%), Positives = 81/105 (77%)
 Frame = -2

Query: 319 SNNRTMALFDSWYSEKDKSKGWKEQDVLVKLMRRGLFQRLGVKARFLDTVYFSGFCQDSR 140
           SN  T+ LFD WY  KDKS G KEQDVL  ++  G+F++LG++ RFLDT+YFSGFCQDS+
Sbjct: 160 SNKNTIQLFDLWYERKDKSTGQKEQDVLNGMLHGGVFKKLGLRVRFLDTLYFSGFCQDSK 219

Query: 139 DVRLVSTVHANCCRSISAKVADLTTVIHDWKRFLSSIPANETMPF 5
           D+R V+TVHANCCR+ISAK+ DL+ VI DWKRF  S   NET  F
Sbjct: 220 DIRAVTTVHANCCRTISAKITDLSAVIDDWKRFKRS-AVNETSTF 263


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