BLASTX nr result

ID: Angelica23_contig00035436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035436
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containi...   157   7e-37
emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]   153   1e-35
ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_002515972.1| pentatricopeptide repeat-containing protein,...   137   7e-31

>ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Vitis vinifera]
          Length = 539

 Score =  157 bits (398), Expect = 7e-37
 Identities = 75/104 (72%), Positives = 85/104 (81%)
 Frame = -2

Query: 315 KALARLSEFRVGLGVHCRIMKTGFLLDKFVGNSLIHMYGSCGNVICARKVFDEMSEKNWV 136
           KA+ARLSE R+ L VHCRI K G   D+F+ NSLIHMYGSCG++  ARKVFDEM  +N V
Sbjct: 120 KAVARLSELRLALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSV 179

Query: 135 SWNCMLDGYAKCGDIVSAREVFELMPDRDVVSWSSLIDGYVKDG 4
           SWN MLDGYAKCGD+ SAR+VFE MPDRDVVSWSS+IDG VK G
Sbjct: 180 SWNAMLDGYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGG 223


>emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
          Length = 532

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/104 (70%), Positives = 83/104 (79%)
 Frame = -2

Query: 315 KALARLSEFRVGLGVHCRIMKTGFLLDKFVGNSLIHMYGSCGNVICARKVFDEMSEKNWV 136
           KA+ARLSE R+ L VHCRI K G   D+F+ NSLIHMYGSCG++  ARKVFDEM  +N V
Sbjct: 113 KAVARLSELRLALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVFDEMLIRNSV 172

Query: 135 SWNCMLDGYAKCGDIVSAREVFELMPDRDVVSWSSLIDGYVKDG 4
           SWN MLDGYAKCGD+ SA +VF  MPDRDVVSWSS+IDG VK G
Sbjct: 173 SWNAMLDGYAKCGDLDSAHQVFXSMPDRDVVSWSSMIDGCVKGG 216


>ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 442

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/102 (64%), Positives = 80/102 (78%)
 Frame = -2

Query: 315 KALARLSEFRVGLGVHCRIMKTGFLLDKFVGNSLIHMYGSCGNVICARKVFDEMSEKNWV 136
           KA ++L    +G+ VH  I+K+G  +DKF+ NSLIHMY SC ++  ARKVFDEM  KN V
Sbjct: 121 KATSKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLV 180

Query: 135 SWNCMLDGYAKCGDIVSAREVFELMPDRDVVSWSSLIDGYVK 10
           +WN MLDGYAKCGD+  AREVF LMP++DVVSWSSLIDGYVK
Sbjct: 181 TWNAMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVK 222


>ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 542

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/102 (64%), Positives = 80/102 (78%)
 Frame = -2

Query: 315 KALARLSEFRVGLGVHCRIMKTGFLLDKFVGNSLIHMYGSCGNVICARKVFDEMSEKNWV 136
           KA ++L    +G+ VH  I+K+G  +DKF+ NSLIHMY SC ++  ARKVFDEM  KN V
Sbjct: 121 KATSKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLV 180

Query: 135 SWNCMLDGYAKCGDIVSAREVFELMPDRDVVSWSSLIDGYVK 10
           +WN MLDGYAKCGD+  AREVF LMP++DVVSWSSLIDGYVK
Sbjct: 181 TWNAMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVK 222


>ref|XP_002515972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544877|gb|EEF46392.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/104 (61%), Positives = 81/104 (77%)
 Frame = -2

Query: 315 KALARLSEFRVGLGVHCRIMKTGFLLDKFVGNSLIHMYGSCGNVICARKVFDEMSEKNWV 136
           KA ARL +  +G  +H  I+K GF  D+F+ NSL+HMY S G++ CAR VFD M  KN V
Sbjct: 122 KASARLLKRELGFSIHAHIIKHGFESDRFISNSLVHMYASFGDISCARYVFDGMPVKNLV 181

Query: 135 SWNCMLDGYAKCGDIVSAREVFELMPDRDVVSWSSLIDGYVKDG 4
           SWN M+DG AKCG++V AR++F+LMPDRDV+SWSSLIDGYVK+G
Sbjct: 182 SWNSMVDGSAKCGNMVLARQLFDLMPDRDVLSWSSLIDGYVKNG 225


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