BLASTX nr result

ID: Angelica23_contig00035403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035403
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 prote...    75   6e-12
emb|CBI30076.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_003547641.1| PREDICTED: uncharacterized protein LOC100817...    73   2e-11
ref|XP_003548802.1| PREDICTED: uncharacterized protein LOC100812...    71   8e-11
ref|XP_003618503.1| Group II intron-encoded protein ltrA [Medica...    65   4e-09

>ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 protein-like [Vitis
           vinifera]
          Length = 757

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 15/109 (13%)
 Frame = +1

Query: 13  RKATPQFNISRVSISRLFST--------SPLTKPQLKTLILNQYTHGKFTNLIQNVVASP 168
           R AT    +S +S+ R  ST        +PLTKPQLK L++N Y+ GKF+NLIQNVVASP
Sbjct: 7   RIATLHSRVSILSLLRRHSTLPPNPNPTTPLTKPQLKALVINHYSRGKFSNLIQNVVASP 66

Query: 169 CFLLTAC-------HXXXXXXXXXXXTHFSLTQMAEQLAKNQFNIKECC 294
             LL AC       +             FS+ ++  +L +N+F+++ CC
Sbjct: 67  PVLLLACQNLTPRSNDVNSLASPAVALRFSVEELGRELGENRFDVESCC 115


>emb|CBI30076.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 15/109 (13%)
 Frame = +1

Query: 13  RKATPQFNISRVSISRLFST--------SPLTKPQLKTLILNQYTHGKFTNLIQNVVASP 168
           R AT    +S +S+ R  ST        +PLTKPQLK L++N Y+ GKF+NLIQNVVASP
Sbjct: 30  RIATLHSRVSILSLLRRHSTLPPNPNPTTPLTKPQLKALVINHYSRGKFSNLIQNVVASP 89

Query: 169 CFLLTAC-------HXXXXXXXXXXXTHFSLTQMAEQLAKNQFNIKECC 294
             LL AC       +             FS+ ++  +L +N+F+++ CC
Sbjct: 90  PVLLLACQNLTPRSNDVNSLASPAVALRFSVEELGRELGENRFDVESCC 138


>ref|XP_003547641.1| PREDICTED: uncharacterized protein LOC100817946 [Glycine max]
          Length = 732

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 44/97 (45%), Positives = 54/97 (55%)
 Frame = +1

Query: 4   VCFRKATPQFNISRVSISRLFSTSPLTKPQLKTLILNQYTHGKFTNLIQNVVASPCFLLT 183
           + FR A P          RL ST  LTKPQLK L+L+ Y+HGKF NLIQNVVASP  LLT
Sbjct: 12  IVFRNAHP----------RLHST--LTKPQLKALVLDHYSHGKFANLIQNVVASPPVLLT 59

Query: 184 ACHXXXXXXXXXXXTHFSLTQMAEQLAKNQFNIKECC 294
           AC              FS+     +L +N+F++  CC
Sbjct: 60  ACQ--NLSPSFPPPDRFSIPATCLELLENRFDVASCC 94


>ref|XP_003548802.1| PREDICTED: uncharacterized protein LOC100812449 [Glycine max]
          Length = 738

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/82 (46%), Positives = 50/82 (60%)
 Frame = +1

Query: 58  RLFSTSPLTKPQLKTLILNQYTHGKFTNLIQNVVASPCFLLTACHXXXXXXXXXXXTHFS 237
           RL ST  LTKPQLK L+L+ Y+HGKF+NLIQN+VASP  L TAC              FS
Sbjct: 26  RLHST--LTKPQLKALVLDHYSHGKFSNLIQNIVASPPVLHTACQNLSPSFPPPDC--FS 81

Query: 238 LTQMAEQLAKNQFNIKECCFNV 303
           +     +L +N+F++  CC  +
Sbjct: 82  IPATCRELLENRFDVASCCLTL 103


>ref|XP_003618503.1| Group II intron-encoded protein ltrA [Medicago truncatula]
           gi|355493518|gb|AES74721.1| Group II intron-encoded
           protein ltrA [Medicago truncatula]
          Length = 1057

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +1

Query: 49  SISRLFSTSPLTKPQLKTLILNQYTHG-KFTNLIQNVVASPCFLLTACHXXXXXXXXXXX 225
           S  +L    PLT+ QLKTL+LN YT+   FTNL QNVVASP  L TA H           
Sbjct: 129 SSPKLEQQQPLTRTQLKTLVLNNYTNATNFTNLFQNVVASPSVLFTASH----NISTTQN 184

Query: 226 THFSLTQMAEQLAKNQFNIKECCFNV 303
             F    + ++L +N+F++  CCF +
Sbjct: 185 APFHPYSLVQELRENRFDVAACCFTI 210


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