BLASTX nr result

ID: Angelica23_contig00035378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035378
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g...    60   1e-07
ref|XP_003610666.1| F-box/LRR-repeat protein [Medicago truncatul...    56   3e-06
ref|NP_197653.2| F-box, FBD and leucine rich repeat domain-conta...    56   3e-06
ref|XP_003596628.1| F-box/LRR-repeat protein [Medicago truncatul...    56   3e-06
sp|Q9FNK0.1|FDL30_ARATH RecName: Full=Putative F-box/FBD/LRR-rep...    56   3e-06

>ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g52670-like [Glycine
           max]
          Length = 639

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
 Frame = -1

Query: 211 SNKQDIDISSILPEAVFSNIVSWLPVKEAVRTSVLVKRWKHAWKYVTRL---DLDP 53
           SN +  DI S LP+ +   I+S LP KEAVRTS+L KRW++ WK+VT+L   D++P
Sbjct: 267 SNYEGQDIFSDLPDVIIGRILSILPTKEAVRTSILSKRWRNLWKFVTKLHFQDIEP 322


>ref|XP_003610666.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355512001|gb|AES93624.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 494

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/66 (36%), Positives = 44/66 (66%)
 Frame = -1

Query: 211 SNKQDIDISSILPEAVFSNIVSWLPVKEAVRTSVLVKRWKHAWKYVTRLDLDPESISEPY 32
           +N  +  IS++LPE V ++I+S++P K+A+RTS+L K+W+  W  +T+L L    +S  +
Sbjct: 26  ANAVEDTISNMLPEPVITHILSFVPTKDAIRTSILSKKWERRWTSITKLSLHDYQLSFDF 85

Query: 31  VEHVRR 14
              ++R
Sbjct: 86  TIRLKR 91


>ref|NP_197653.2| F-box, FBD and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana] gi|332005668|gb|AED93051.1|
           F-box, FBD and leucine rich repeat domain-containing
           protein [Arabidopsis thaliana]
          Length = 472

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/46 (56%), Positives = 32/46 (69%)
 Frame = -1

Query: 193 DISSILPEAVFSNIVSWLPVKEAVRTSVLVKRWKHAWKYVTRLDLD 56
           D+ S LPE + S I+S+LP K+ VRTSVL KRWK  W  +  LDLD
Sbjct: 18  DLISKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVWLLIPGLDLD 63


>ref|XP_003596628.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485676|gb|AES66879.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 123

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = -1

Query: 193 DISSILPEAVFSNIVSWLPVKEAVRTSVLVKRWKHAWKYVTRLDLD 56
           D+ S LP+ +   I+ +LP KEAVRTSVL K+W + WK++T+LD D
Sbjct: 27  DLISNLPDHIIGYILFFLPTKEAVRTSVLSKKWIYLWKFITKLDFD 72


>sp|Q9FNK0.1|FDL30_ARATH RecName: Full=Putative F-box/FBD/LRR-repeat protein At5g22610
           gi|10178235|dbj|BAB11667.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 502

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/46 (56%), Positives = 32/46 (69%)
 Frame = -1

Query: 193 DISSILPEAVFSNIVSWLPVKEAVRTSVLVKRWKHAWKYVTRLDLD 56
           D+ S LPE + S I+S+LP K+ VRTSVL KRWK  W  +  LDLD
Sbjct: 18  DLISKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVWLLIPGLDLD 63


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