BLASTX nr result

ID: Angelica23_contig00035357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035357
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525140.1| ring finger protein, putative [Ricinus commu...   134   6e-30
ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   128   4e-28
ref|XP_003636091.1| RING finger family protein [Medicago truncat...   125   5e-27
ref|XP_003539544.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   122   2e-26
ref|XP_003541894.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   120   9e-26

>ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
           gi|223535599|gb|EEF37267.1| ring finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/105 (60%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
 Frame = +1

Query: 1   RCVLRRQARRRTSLWQIGLFATAPEPPKTGLDETIIGSLPTFVFKQ---DPKARIIECTV 171
           RCVLRRQAR R ++ ++GL     EPPKTGLD  +I SLP FV+KQ   D +    EC V
Sbjct: 70  RCVLRRQARERANIRRLGLATATSEPPKTGLDPVVIASLPIFVYKQSNGDQEDNDQECAV 129

Query: 172 CLSNLEDGEMIRILPNCKHDFHVACIDTWLSTNSTCPVCRTEVEP 306
           CLS L+D EM R LPNCKH FH  CID WL+++STCP+CRTE EP
Sbjct: 130 CLSVLQDQEMARSLPNCKHTFHAECIDKWLTSHSTCPICRTEAEP 174


>ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
          Length = 247

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/106 (57%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
 Frame = +1

Query: 1   RCVLRRQARRRTSLWQIGLFAT-APEPPKTGLDETIIGSLPTFVFKQDP---KARIIECT 168
           RCVLRR+ARRR++L  I L    + EPPKTGLD+++I SLP F F ++    +    +C 
Sbjct: 55  RCVLRRRARRRSALLSITLSRVHSDEPPKTGLDQSVIDSLPMFKFSENDTQEEGGTTDCA 114

Query: 169 VCLSNLEDGEMIRILPNCKHDFHVACIDTWLSTNSTCPVCRTEVEP 306
           VCLS LE+GE+ R+LPNCKH FH  CID WL T+STCP+CRTE EP
Sbjct: 115 VCLSVLEEGEIARLLPNCKHTFHAECIDKWLGTHSTCPICRTEAEP 160


>ref|XP_003636091.1| RING finger family protein [Medicago truncatula]
           gi|355502026|gb|AES83229.1| RING finger family protein
           [Medicago truncatula] gi|388522379|gb|AFK49251.1|
           unknown [Medicago truncatula]
          Length = 239

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/114 (54%), Positives = 78/114 (68%), Gaps = 12/114 (10%)
 Frame = +1

Query: 1   RCVLRRQARRRTSLWQIGLFATAP-----EPPKTGLDETIIGSLPTFVFKQDPKAR---- 153
           R VL+RQARRR ++ Q+ L          EP  TG+D TII +LPTF+FKQ  +      
Sbjct: 57  RYVLKRQARRRAAIQQLSLTVAQAHTQFAEPANTGVDPTIIAALPTFLFKQKQQEENKNV 116

Query: 154 ---IIECTVCLSNLEDGEMIRILPNCKHDFHVACIDTWLSTNSTCPVCRTEVEP 306
              I+EC VCLS +ED EM+R+LPNCKH FHV CID WL+++STCP CRT+VEP
Sbjct: 117 SKNIVECAVCLSVVEDEEMMRLLPNCKHSFHVGCIDKWLASHSTCPNCRTKVEP 170


>ref|XP_003539544.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Glycine max]
          Length = 239

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/105 (57%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
 Frame = +1

Query: 1   RCVLRRQARRRTSLWQIGL-FATAPEPP--KTGLDETIIGSLPTFVFKQDPKARIIECTV 171
           R  LRRQ RRR +++Q+ L  A A   P   TGL+  +I +LPTF FKQ+      EC V
Sbjct: 46  RVFLRRQTRRRAAIYQLSLNVAQAHAEPHNNTGLNPALITTLPTFPFKQNQHHDSAECAV 105

Query: 172 CLSNLEDGEMIRILPNCKHDFHVACIDTWLSTNSTCPVCRTEVEP 306
           CLS LEDGE +R+LPNCKH FHV+CIDTWLS++STCP+CRT+  P
Sbjct: 106 CLSVLEDGEHVRLLPNCKHSFHVSCIDTWLSSHSTCPICRTKAGP 150


>ref|XP_003541894.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Glycine max]
          Length = 229

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
 Frame = +1

Query: 25  RRRTSLWQIGL---FATAPEPPKTGLDETIIGSLPTFVFKQDPKARIIECTVCLSNLEDG 195
           RRR +++Q+ L    A A     TGLD  +I +LPTF FKQ P    +ECTVCLS LEDG
Sbjct: 50  RRRAAIYQLSLNVAHAHAEPDNNTGLDPVLITTLPTFPFKQ-PNNDSVECTVCLSVLEDG 108

Query: 196 EMIRILPNCKHDFHVACIDTWLSTNSTCPVCRTEVEP 306
           E +R+LPNCKH FHV CIDTWL+++STCP+CRT+ EP
Sbjct: 109 EQVRLLPNCKHSFHVGCIDTWLASHSTCPICRTKAEP 145


Top