BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035339
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525676.1| transcription initiation factor brf1, putati...    92   1e-16
emb|CBI31214.3| unnamed protein product [Vitis vinifera]               91   4e-16
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ...    85   2e-14
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ...    85   2e-14
ref|XP_002882615.1| RNA polymerase II transcription factor [Arab...    84   3e-14

>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
           gi|223534976|gb|EEF36659.1| transcription initiation
           factor brf1, putative [Ricinus communis]
          Length = 625

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 27/182 (14%)
 Frame = -3

Query: 766 EVDEYLGDDKEAEGKKVLWEVMNKEYIREQDLKKSASAAGE------------------- 644
           EVD YL +++EA+ KK++WE MN+EY+ EQ  K++ +AA +                   
Sbjct: 427 EVDGYLHNEEEAQFKKIIWEEMNREYLEEQAAKEAVAAAAKEAWEAKFKDCPEEMQAARE 486

Query: 643 -------AIKKPRKKQMQKQGTKDDNAPAPSPASVEATEQTSNKKRLNSLINFDALNELF 485
                  A+ K +K++ QK+  +  N+  P+ ++ EA  Q   KKRL+S IN+D L +LF
Sbjct: 487 LEAAVAAALAKSKKEKQQKRAAEAKNS-VPAQSASEAARQMLTKKRLSSKINYDVLEKLF 545

Query: 484 EDDAAPNVKKNRTESNHDT-VAWDQEAVAEEIVGDDSGNEDHEQVEDYNSDCDFF*RDSR 308
           ++  + + KK RTES  DT   + Q     + +G  + NE  E  E Y  + D +  D  
Sbjct: 546 DEPGSKDPKKLRTESESDTDEKFPQTDDRNDDLGPGNKNEKEEDAEAYKYNNDQY--DEN 603

Query: 307 VD 302
           VD
Sbjct: 604 VD 605


>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 45/190 (23%)
 Frame = -3

Query: 769 VEVDEYLGDDKEAEGKKVLWEVMNKEYIREQDLKKSASAAGE------------------ 644
           VEVD YL ++KE + KK++WE MNKEY+ EQ  K++A+AA +                  
Sbjct: 427 VEVDGYLHNEKEKQFKKIIWEAMNKEYLEEQAAKEAAAAAAKEAYEASFKDNPEGLKAAQ 486

Query: 643 --------AIKKPRKKQMQKQGTKDDNAPAPSPASVEATEQTSNKKRLNSLINFDALNEL 488
                   A+ K RK++ QK+  +  N   P+  + EAT Q   KKRL+S IN+D L +L
Sbjct: 487 ELAAATAAAVAKSRKERQQKRAAEAKNT-VPAQTAAEATRQMLTKKRLSSKINYDVLEKL 545

Query: 487 FEDDA-APNVKKNRTES------------------NHDTVAWDQEAVAEEIVGDDSGNED 365
           F+D   + N KK RTES                    D +A + E   E   G   GN+ 
Sbjct: 546 FDDSVPSENPKKIRTESQTENNDHKAPISNKKLEPEEDDLAPEDEFGYEGDTGGLYGNDL 605

Query: 364 HEQVEDYNSD 335
           + +  DY+ D
Sbjct: 606 YGEGYDYDDD 615


>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 663

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 28/175 (16%)
 Frame = -3

Query: 769 VEVDEYLGDDKEAEGKKVLWEVMNKEYIREQDLKKSASAAGE------------------ 644
           VEVD YL +++E   KK++WE MN+EY+ EQ  K +A+AA +                  
Sbjct: 470 VEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDLKAAK 529

Query: 643 --------AIKKPRKKQMQKQGTKDDNAPAPSPASVEATEQTSNKKRLNSLINFDALNEL 488
                   A+ K RK++ +K+  +  NA  P+  + EAT Q  NKKRL+S IN+D L++L
Sbjct: 530 DLAEAAAAAVAKSRKERQRKRAAEAKNA-TPAQTAAEATRQMLNKKRLSSKINYDVLDKL 588

Query: 487 FEDDAA--PNVKKNRTESNHDTVAWDQEAVAEEIVGDDSGNEDHEQVEDYNSDCD 329
           F++ A   P+ KK   E   +T          E           EQ EDY+   D
Sbjct: 589 FDESAGMEPSAKKKCEEQAEETEKTRNTTKEFETT--------EEQEEDYDDGYD 635


>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 643

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 28/175 (16%)
 Frame = -3

Query: 769 VEVDEYLGDDKEAEGKKVLWEVMNKEYIREQDLKKSASAAGE------------------ 644
           VEVD YL +++E   KK++WE MN+EY+ EQ  K +A+AA +                  
Sbjct: 470 VEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDLKAAK 529

Query: 643 --------AIKKPRKKQMQKQGTKDDNAPAPSPASVEATEQTSNKKRLNSLINFDALNEL 488
                   A+ K RK++ +K+  +  NA  P+  + EAT Q  NKKRL+S IN+D L++L
Sbjct: 530 DLAEAAAAAVAKSRKERQRKRAAEAKNA-TPAQTAAEATRQMLNKKRLSSKINYDVLDKL 588

Query: 487 FEDDAA--PNVKKNRTESNHDTVAWDQEAVAEEIVGDDSGNEDHEQVEDYNSDCD 329
           F++ A   P+ KK   E   +T          E           EQ EDY+   D
Sbjct: 589 FDESAGMEPSAKKKCEEQAEETEKTRNTTKEFETT--------EEQEEDYDDGYD 635


>ref|XP_002882615.1| RNA polymerase II transcription factor [Arabidopsis lyrata subsp.
           lyrata] gi|297328455|gb|EFH58874.1| RNA polymerase II
           transcription factor [Arabidopsis lyrata subsp. lyrata]
          Length = 600

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 26/173 (15%)
 Frame = -3

Query: 766 EVDEYLGDDKEAEGKKVLWEVMNKEYIREQDLKKSA-SAAGEAIK--------------- 635
           EVD Y+ +++E   K + W  MNK+Y+ EQ  K++A  AA EA+K               
Sbjct: 406 EVDGYINNEEETHYKTITWTEMNKDYLEEQAAKEAALKAASEALKASNSNCPEDARKAFE 465

Query: 634 -------KPRKKQMQKQGTKDDNAPAPSPASVEATEQTSNKKRLNSLINFDALNELFEDD 476
                  K RK++ QK+  +  NA AP   ++EA  +T  KKRL+ +IN+D L ELF+  
Sbjct: 466 AAKADAAKSRKEKQQKKAEEAKNA-APPATAMEAVRRTLEKKRLSLVINYDVLEELFDTS 524

Query: 475 AA-PNVKKNRTESNHDTVAWDQEAVAEEIVGDDSGNEDHEQ--VEDYNSDCDF 326
            A  + K+++TE++ +     +    E+   +D   ED E+  VE Y+ + DF
Sbjct: 525 TAEKSPKRSKTETDIEKKKEVKSNEHEKGENEDEAEEDEEEGSVESYDMNTDF 577