BLASTX nr result

ID: Angelica23_contig00035285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035285
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subun...   406   e-114
ref|NP_974991.1| transducin/WD40 domain-containing protein [Arab...   400   e-111
ref|NP_974992.1| transducin/WD40 domain-containing protein [Arab...   400   e-111
ref|NP_568990.1| transducin/WD40 domain-containing protein [Arab...   398   e-110
ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arab...   398   e-110

>ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subunit B [Vitis vinifera]
           gi|296088566|emb|CBI37557.3| unnamed protein product
           [Vitis vinifera]
          Length = 456

 Score =  406 bits (1043), Expect(2) = e-114
 Identities = 194/256 (75%), Positives = 224/256 (87%), Gaps = 1/256 (0%)
 Frame = +3

Query: 48  SCIIWDMNKGSVHQILEAHCHYVQGVAWDPLAKYIASLSSDRSLRIYINKP-TKTKGVEK 224
           SCIIWD+NKGSVHQIL+AH HYVQGVAWDP +KY+ASLSSDRS RIY+NKP  KTKG+EK
Sbjct: 135 SCIIWDVNKGSVHQILDAHLHYVQGVAWDPQSKYVASLSSDRSCRIYVNKPQNKTKGIEK 194

Query: 225 MNHVCQHVITKVDQQTVDNSKSAKSHLFHDETLPSFFRRLSWSPDGSFLLVPAGSYKISP 404
           MN+VCQHVITK +QQ  D+SKS KSHLFHDETLPSFFRRL WSPDGSFLLVPAGSYK SP
Sbjct: 195 MNYVCQHVITKSEQQMTDDSKSVKSHLFHDETLPSFFRRLKWSPDGSFLLVPAGSYKFSP 254

Query: 405 VSEPINTAYAFSRKDFSRPALLLPSASKPVVAVRFCPKSFSLRGTSASAFFKLPYRLIFA 584
            S P+NTAY FSRKD SRPAL LP +SKPV+AVRFCP +F L+G++++ FFKLPYRLIFA
Sbjct: 255 ASGPVNTAYVFSRKDLSRPALQLPGSSKPVIAVRFCPMAFHLQGSNSAGFFKLPYRLIFA 314

Query: 585 VATLNSLYIYDTESVQPIAVYAGLHYAAITDISWSPTGKYLALSSQDGYCSLVEFVDDEL 764
           VA+LNSLYIYDTES+ PIA+ AGLHYAAITDI+WS  GKYLA+SSQDGY +LVEF + EL
Sbjct: 315 VASLNSLYIYDTESIPPIAILAGLHYAAITDIAWSHDGKYLAISSQDGYSTLVEFENGEL 374

Query: 765 GSPICLTEDKNDTSNE 812
           GSP  L+E ++ + +E
Sbjct: 375 GSPFLLSEVESVSGDE 390



 Score = 32.3 bits (72), Expect(2) = e-114
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +1

Query: 1   QWSGDGAFLISGSVD 45
           QWS DGAFLISGSVD
Sbjct: 119 QWSTDGAFLISGSVD 133


>ref|NP_974991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|75337830|sp|Q9SXY1.1|FAS2_ARATH RecName:
           Full=Chromatin assembly factor 1 subunit FAS2;
           Short=CAF-1 subunit FAS2; AltName: Full=CAF-1 p60
           homolog; AltName: Full=Protein FASCIATA 2
           gi|4884488|dbj|BAA77766.1| FAS2 [Arabidopsis thaliana]
           gi|10178066|dbj|BAB11430.1| FAS2 [Arabidopsis thaliana]
           gi|332010547|gb|AED97930.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 487

 Score =  400 bits (1028), Expect(2) = e-111
 Identities = 192/257 (74%), Positives = 216/257 (84%), Gaps = 2/257 (0%)
 Frame = +3

Query: 48  SCIIWDMNKGSVHQILEAHCHYVQGVAWDPLAKYIASLSSDRSLRIYINKP-TKTKGVEK 224
           SCIIWD+NKGSVHQIL+AHCHYVQGVAWDPLAKY+ASLSSDR+ RIY NKP TK+KGVEK
Sbjct: 135 SCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKPQTKSKGVEK 194

Query: 225 MNHVCQHVITKVDQQTVDNSKSAKSHLFHDETLPSFFRRLSWSPDGSFLLVPAGSYKISP 404
           MN+VCQHVI K DQQ  D +K+ K+HLFHDETLPSFFRRLSWSPDGSFLL+PAGS+K+SP
Sbjct: 195 MNYVCQHVIMKADQQRGDETKTIKTHLFHDETLPSFFRRLSWSPDGSFLLIPAGSFKVSP 254

Query: 405 VSEPINTAYAFSRKDFSRPALLLPSASKPVVAVRFCPKSFSLRGTSA-SAFFKLPYRLIF 581
            SE +N  Y FSRKD SRPAL LP ASKPVV VRFCP +F LRG+S+   FFKLPYRL+F
Sbjct: 255 TSEAVNATYVFSRKDLSRPALQLPGASKPVVVVRFCPVAFKLRGSSSEEGFFKLPYRLVF 314

Query: 582 AVATLNSLYIYDTESVQPIAVYAGLHYAAITDISWSPTGKYLALSSQDGYCSLVEFVDDE 761
           A+ATLNS+YIYDTE V PIAV AGLHYAAITDI+WSP   YLALSSQDGYC+LVEF D E
Sbjct: 315 AIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQDGYCTLVEFEDKE 374

Query: 762 LGSPICLTEDKNDTSNE 812
           LG  + ++  K     E
Sbjct: 375 LGEAVSISVGKKPVDGE 391



 Score = 28.5 bits (62), Expect(2) = e-111
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 1   QWSGDGAFLISGSVD 45
           QWS D A+LISGSVD
Sbjct: 119 QWSPDDAYLISGSVD 133


>ref|NP_974992.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332010545|gb|AED97928.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 428

 Score =  400 bits (1028), Expect(2) = e-111
 Identities = 192/257 (74%), Positives = 216/257 (84%), Gaps = 2/257 (0%)
 Frame = +3

Query: 48  SCIIWDMNKGSVHQILEAHCHYVQGVAWDPLAKYIASLSSDRSLRIYINKP-TKTKGVEK 224
           SCIIWD+NKGSVHQIL+AHCHYVQGVAWDPLAKY+ASLSSDR+ RIY NKP TK+KGVEK
Sbjct: 76  SCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKPQTKSKGVEK 135

Query: 225 MNHVCQHVITKVDQQTVDNSKSAKSHLFHDETLPSFFRRLSWSPDGSFLLVPAGSYKISP 404
           MN+VCQHVI K DQQ  D +K+ K+HLFHDETLPSFFRRLSWSPDGSFLL+PAGS+K+SP
Sbjct: 136 MNYVCQHVIMKADQQRGDETKTIKTHLFHDETLPSFFRRLSWSPDGSFLLIPAGSFKVSP 195

Query: 405 VSEPINTAYAFSRKDFSRPALLLPSASKPVVAVRFCPKSFSLRGTSA-SAFFKLPYRLIF 581
            SE +N  Y FSRKD SRPAL LP ASKPVV VRFCP +F LRG+S+   FFKLPYRL+F
Sbjct: 196 TSEAVNATYVFSRKDLSRPALQLPGASKPVVVVRFCPVAFKLRGSSSEEGFFKLPYRLVF 255

Query: 582 AVATLNSLYIYDTESVQPIAVYAGLHYAAITDISWSPTGKYLALSSQDGYCSLVEFVDDE 761
           A+ATLNS+YIYDTE V PIAV AGLHYAAITDI+WSP   YLALSSQDGYC+LVEF D E
Sbjct: 256 AIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQDGYCTLVEFEDKE 315

Query: 762 LGSPICLTEDKNDTSNE 812
           LG  + ++  K     E
Sbjct: 316 LGEAVSISVGKKPVDGE 332



 Score = 28.5 bits (62), Expect(2) = e-111
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 1   QWSGDGAFLISGSVD 45
           QWS D A+LISGSVD
Sbjct: 60  QWSPDDAYLISGSVD 74


>ref|NP_568990.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|14030689|gb|AAK53019.1|AF375435_1 AT5g64630/MUB3_15
           [Arabidopsis thaliana] gi|18491113|gb|AAL69523.1|
           AT5g64630/MUB3_15 [Arabidopsis thaliana]
           gi|332010546|gb|AED97929.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 397

 Score =  398 bits (1022), Expect(2) = e-110
 Identities = 190/248 (76%), Positives = 214/248 (86%), Gaps = 2/248 (0%)
 Frame = +3

Query: 48  SCIIWDMNKGSVHQILEAHCHYVQGVAWDPLAKYIASLSSDRSLRIYINKP-TKTKGVEK 224
           SCIIWD+NKGSVHQIL+AHCHYVQGVAWDPLAKY+ASLSSDR+ RIY NKP TK+KGVEK
Sbjct: 135 SCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKPQTKSKGVEK 194

Query: 225 MNHVCQHVITKVDQQTVDNSKSAKSHLFHDETLPSFFRRLSWSPDGSFLLVPAGSYKISP 404
           MN+VCQHVI K DQQ  D +K+ K+HLFHDETLPSFFRRLSWSPDGSFLL+PAGS+K+SP
Sbjct: 195 MNYVCQHVIMKADQQRGDETKTIKTHLFHDETLPSFFRRLSWSPDGSFLLIPAGSFKVSP 254

Query: 405 VSEPINTAYAFSRKDFSRPALLLPSASKPVVAVRFCPKSFSLRGTSA-SAFFKLPYRLIF 581
            SE +N  Y FSRKD SRPAL LP ASKPVV VRFCP +F LRG+S+   FFKLPYRL+F
Sbjct: 255 TSEAVNATYVFSRKDLSRPALQLPGASKPVVVVRFCPVAFKLRGSSSEEGFFKLPYRLVF 314

Query: 582 AVATLNSLYIYDTESVQPIAVYAGLHYAAITDISWSPTGKYLALSSQDGYCSLVEFVDDE 761
           A+ATLNS+YIYDTE V PIAV AGLHYAAITDI+WSP   YLALSSQDGYC+LVEF D E
Sbjct: 315 AIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQDGYCTLVEFEDKE 374

Query: 762 LGSPICLT 785
           LG  + ++
Sbjct: 375 LGEAVSIS 382



 Score = 28.5 bits (62), Expect(2) = e-110
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 1   QWSGDGAFLISGSVD 45
           QWS D A+LISGSVD
Sbjct: 119 QWSPDDAYLISGSVD 133


>ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arabidopsis lyrata subsp.
           lyrata] gi|297310746|gb|EFH41170.1| hypothetical protein
           ARALYDRAFT_496675 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  398 bits (1022), Expect(2) = e-110
 Identities = 192/259 (74%), Positives = 219/259 (84%), Gaps = 4/259 (1%)
 Frame = +3

Query: 48  SCIIWDMNKGSVHQILEAHCHYVQGVAWDPLAKYIASLSSDRSLRIYINKP-TKTKGVEK 224
           SCIIWD++KG+VHQIL+AHCHYVQGVAWDPLAKY+ASLSSDR+ RIY+NKP TK+KGVEK
Sbjct: 135 SCIIWDVSKGTVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYVNKPQTKSKGVEK 194

Query: 225 MNHVCQHVITKVDQQTVDNSKSAKSHLFHDETLPSFFRRLSWSPDGSFLLVPAGSYKISP 404
           +N+VCQHVITK DQQ  D +K+ K+HLFHDETLPSFFRRLSWSPDGSFLL+PAGS+K+SP
Sbjct: 195 LNYVCQHVITKADQQRGDETKTIKTHLFHDETLPSFFRRLSWSPDGSFLLIPAGSFKVSP 254

Query: 405 VSEPINTAYAFSRKDFSRPALLLPSASKPVVAVRFCPKSFSLRGT-SASAFFKLPYRLIF 581
            SE +N  Y FSRKD SRPAL LP ASKPVV VRFCP +F LRG+ S   FFKLPYRL+F
Sbjct: 255 TSEAVNATYVFSRKDLSRPALQLPGASKPVVVVRFCPVAFKLRGSHSEEGFFKLPYRLVF 314

Query: 582 AVATLNSLYIYDTESVQPIAVYAGLHYAAITDISWSPTGKYLALSSQDGYCSLVEFVDDE 761
           A+ATLNS+YIYDTE V PIAV AGLHYAAITDI+WSP   YLALSSQDGYC+LVEF D+E
Sbjct: 315 AIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQDGYCTLVEFEDNE 374

Query: 762 LGS--PICLTEDKNDTSNE 812
           LG   PI +T  +     E
Sbjct: 375 LGESIPISITVGRKPVDAE 393



 Score = 27.7 bits (60), Expect(2) = e-110
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 1   QWSGDGAFLISGSVD 45
           QWS D A+LISGSVD
Sbjct: 119 QWSLDDAYLISGSVD 133


Top