BLASTX nr result

ID: Angelica23_contig00035205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035205
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32131.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   129   3e-28
ref|XP_004170207.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small ...   128   4e-28
ref|XP_004135478.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   128   4e-28
ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31,...   128   4e-28

>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  129 bits (324), Expect = 3e-28
 Identities = 65/75 (86%), Positives = 69/75 (92%)
 Frame = -2

Query: 226 APNLSAILGSDVAAKLMGTAGGLSELAKKPACNVQRLGAKRKNLAGFSTVTCQFRVGYIE 47
           APNLSAI+GS VAAKLMGTAGGL+ LAK PACNVQ LGAK+KNLAGFST T QFRVGYIE
Sbjct: 256 APNLSAIVGSAVAAKLMGTAGGLTALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIE 315

Query: 46  QTEIFQSTPPALRMR 2
           QTEIFQSTPP+LRMR
Sbjct: 316 QTEIFQSTPPSLRMR 330


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
           vinifera]
          Length = 489

 Score =  129 bits (324), Expect = 3e-28
 Identities = 65/75 (86%), Positives = 69/75 (92%)
 Frame = -2

Query: 226 APNLSAILGSDVAAKLMGTAGGLSELAKKPACNVQRLGAKRKNLAGFSTVTCQFRVGYIE 47
           APNLSAI+GS VAAKLMGTAGGL+ LAK PACNVQ LGAK+KNLAGFST T QFRVGYIE
Sbjct: 222 APNLSAIVGSAVAAKLMGTAGGLTALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIE 281

Query: 46  QTEIFQSTPPALRMR 2
           QTEIFQSTPP+LRMR
Sbjct: 282 QTEIFQSTPPSLRMR 296


>ref|XP_004170207.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small nuclear
           ribonucleoprotein Prp31-like [Cucumis sativus]
          Length = 484

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/75 (86%), Positives = 68/75 (90%)
 Frame = -2

Query: 226 APNLSAILGSDVAAKLMGTAGGLSELAKKPACNVQRLGAKRKNLAGFSTVTCQFRVGYIE 47
           APNLSAI+GS VAAKLMGTAGGL+ LAK PACNVQ LGAKRKNLAGFST T QFRVGYIE
Sbjct: 217 APNLSAIVGSAVAAKLMGTAGGLAALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIE 276

Query: 46  QTEIFQSTPPALRMR 2
           QTEIFQSTPP L+MR
Sbjct: 277 QTEIFQSTPPPLKMR 291


>ref|XP_004135478.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Cucumis sativus]
          Length = 476

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/75 (86%), Positives = 68/75 (90%)
 Frame = -2

Query: 226 APNLSAILGSDVAAKLMGTAGGLSELAKKPACNVQRLGAKRKNLAGFSTVTCQFRVGYIE 47
           APNLSAI+GS VAAKLMGTAGGL+ LAK PACNVQ LGAKRKNLAGFST T QFRVGYIE
Sbjct: 209 APNLSAIVGSAVAAKLMGTAGGLAALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIE 268

Query: 46  QTEIFQSTPPALRMR 2
           QTEIFQSTPP L+MR
Sbjct: 269 QTEIFQSTPPPLKMR 283


>ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31, putative [Ricinus
           communis] gi|223535305|gb|EEF36980.1| U4/U6 small
           nuclear ribonucleoprotein Prp31, putative [Ricinus
           communis]
          Length = 774

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/75 (85%), Positives = 69/75 (92%)
 Frame = -2

Query: 226 APNLSAILGSDVAAKLMGTAGGLSELAKKPACNVQRLGAKRKNLAGFSTVTCQFRVGYIE 47
           APNLSAI+GS VAAKLMGTAGGLS LAK PACNVQ LGAK+KNLAGFST T QFRVGYIE
Sbjct: 534 APNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIE 593

Query: 46  QTEIFQSTPPALRMR 2
           QTE+FQSTPP+LR+R
Sbjct: 594 QTEVFQSTPPSLRIR 608


Top