BLASTX nr result

ID: Angelica23_contig00035190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035190
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16128.3| unnamed protein product [Vitis vinifera]              143   3e-32
emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]   134   1e-29
ref|XP_002302937.1| predicted protein [Populus trichocarpa] gi|2...   129   4e-28
ref|XP_002872617.1| pentatricopeptide repeat-containing protein ...   125   7e-27
ref|XP_002872610.1| pentatricopeptide repeat-containing protein ...   125   7e-27

>emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  143 bits (360), Expect = 3e-32
 Identities = 79/184 (42%), Positives = 106/184 (57%), Gaps = 11/184 (5%)
 Frame = +2

Query: 125 SMSLIPRMVKLPPLKALSLFNSST----HHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
           ++ L+P+MVK PPLKALSLF SS      H+                             
Sbjct: 7   ALILLPKMVKSPPLKALSLFTSSALQGFQHTHQSISFILHLLISSNLFSHSQSLLLKLIS 66

Query: 293 GRVEPSI---SSLINHLPP----SYAYSTALYEVIINAHVKSQVPQHTLFYFYEMLDKGL 451
           G++  S    SSL + L      S+     ++E IINAHV+SQ+P+  LFYF +M+ +GL
Sbjct: 67  GQISSSSFTPSSLFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGL 126

Query: 452 VPTSNTYNNVLIYLVKGRIFSESWDFFNETKGKVVLDLYSFGIMVKGCCDNNEMSKAFEV 631
           VP SNT+NN+LI L+K   F ++W  FNETKG V LD+YSFGIM+KGCC+   + K FEV
Sbjct: 127 VPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEV 186

Query: 632 LGMV 643
           LG +
Sbjct: 187 LGQM 190


>emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  134 bits (337), Expect = 1e-29
 Identities = 76/177 (42%), Positives = 99/177 (55%), Gaps = 11/177 (6%)
 Frame = +2

Query: 146 MVKLPPLKALSLFNSST----HHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVEPSI 313
           MVK PPLKALSLF SS      H+                             G++  S 
Sbjct: 1   MVKSPPLKALSLFTSSALQGXQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSS 60

Query: 314 ---SSLINHLPP----SYAYSTALYEVIINAHVKSQVPQHTLFYFYEMLDKGLVPTSNTY 472
              SSL + L      S+     ++E IINAHV+SQ+P+  LFY  +M+ +GLVP SNT+
Sbjct: 61  FTPSSLFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTF 120

Query: 473 NNVLIYLVKGRIFSESWDFFNETKGKVVLDLYSFGIMVKGCCDNNEMSKAFEVLGMV 643
           NN+LI L+K   F ++W  FNETKG V LD+YSFGIM+KGCC+   + K FEVLG +
Sbjct: 121 NNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM 177


>ref|XP_002302937.1| predicted protein [Populus trichocarpa] gi|222844663|gb|EEE82210.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  129 bits (325), Expect = 4e-28
 Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 10/183 (5%)
 Frame = +2

Query: 125 SMSLIPRMVKLPPLKALSLFNSS-------THHSPXXXXXXXXXXXXXXXXXXXXXXXXX 283
           ++ LI +MVK+PPL+ALSLFNSS       THHS                          
Sbjct: 6   ALILIQKMVKIPPLQALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILS 65

Query: 284 XXXGRVEPSISSLINHLPPSY--AYSTAL-YEVIINAHVKSQVPQHTLFYFYEMLDKGLV 454
                   ++ SL++HL  +   + +TAL YE IINAH+KSQ+    L +F EM+DKGLV
Sbjct: 66  NKISSPFFTVPSLLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLV 125

Query: 455 PTSNTYNNVLIYLVKGRIFSESWDFFNETKGKVVLDLYSFGIMVKGCCDNNEMSKAFEVL 634
              N +N++L  LV+   F ++W FFNE K +V  D+YSFGIM+KGCC+N  + K+F++L
Sbjct: 126 FRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLL 185

Query: 635 GMV 643
           G++
Sbjct: 186 GLL 188


>ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297318454|gb|EFH48876.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 584

 Score =  125 bits (314), Expect = 7e-27
 Identities = 70/179 (39%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
 Frame = +2

Query: 125 SMSLIPRMVKLPPLKALSLFNSST----HHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
           ++ L+  ++K+PPLKA SL NS       H+                             
Sbjct: 8   TLILLANLIKVPPLKAFSLLNSPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQVIS 67

Query: 293 GRVEPSI---SSLINHLPPSYAYSTA--LYEVIINAHVKSQVPQHTLFYFYEMLDKGLVP 457
           G+++      SSL+++L  S    T   LYEVIINA+V+SQ    +++YF EM+DKG VP
Sbjct: 68  GKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVP 127

Query: 458 TSNTYNNVLIYLVKGRIFSESWDFFNETKGKVVLDLYSFGIMVKGCCDNNEMSKAFEVL 634
            SN +NN+L ++V    F++ W FFNE+K KVVLD+YSFGI++KGCC+  E+ K+F++L
Sbjct: 128 GSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLL 186


>ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297318447|gb|EFH48869.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 575

 Score =  125 bits (314), Expect = 7e-27
 Identities = 70/179 (39%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
 Frame = +2

Query: 125 SMSLIPRMVKLPPLKALSLFNSST----HHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
           ++ L+  ++K+PPLKA SL NS       H+                             
Sbjct: 8   TLILLANLIKVPPLKAFSLLNSPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQVIS 67

Query: 293 GRVEPSI---SSLINHLPPSYAYSTA--LYEVIINAHVKSQVPQHTLFYFYEMLDKGLVP 457
           G+++      SSL+++L  S    T   LYEVIINA+V+SQ    +++YF EM+DKG VP
Sbjct: 68  GKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVP 127

Query: 458 TSNTYNNVLIYLVKGRIFSESWDFFNETKGKVVLDLYSFGIMVKGCCDNNEMSKAFEVL 634
            SN +NN+L ++V    F++ W FFNE+K KVVLD+YSFGI++KGCC+  E+ K+F++L
Sbjct: 128 GSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLL 186


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