BLASTX nr result

ID: Angelica23_contig00034466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00034466
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   233   2e-59
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   232   2e-59
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         231   5e-59
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   231   5e-59
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   230   8e-59

>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  233 bits (593), Expect = 2e-59
 Identities = 108/158 (68%), Positives = 134/158 (84%)
 Frame = +2

Query: 2   AKKPLELVHSDLCGPMRTSSIGGSRYFLTFIDDYSRKMWIYFLKEKSQVFEVFKDFKAYV 181
           A+KPLEL+H+D+CGP++  S+G S YFL FIDD+SRK W+YFLKEKS+VFE+FK FKA+V
Sbjct: 523 AQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHV 582

Query: 182 EKESGRSLKTLRSDRGGEYMSEEFGSFLKKHGIRHQLTVRSTPQQNGVAERKNRIIMELV 361
           EKESG  +KT+RSDRGGE+ S+EF  + + +GIR QLTV  +PQQNGVAERKNR I+E+ 
Sbjct: 583 EKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMA 642

Query: 362 RSMLKTKGLPKMFWAEAIACACYVLNRAPTKSVQGKTP 475
           RSMLK+K LPK  WAEA+ACA Y+LNR+PTKSV GKTP
Sbjct: 643 RSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTP 680


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score =  232 bits (592), Expect = 2e-59
 Identities = 115/158 (72%), Positives = 128/158 (81%)
 Frame = +2

Query: 2   AKKPLELVHSDLCGPMRTSSIGGSRYFLTFIDDYSRKMWIYFLKEKSQVFEVFKDFKAYV 181
           A KPLELVH+DLCGPMRT++ GG+RYFLTFIDDYSRK WIY LKEKS  FE FK FKA V
Sbjct: 494 ASKPLELVHTDLCGPMRTTTHGGNRYFLTFIDDYSRKTWIYLLKEKSATFECFKTFKAMV 553

Query: 182 EKESGRSLKTLRSDRGGEYMSEEFGSFLKKHGIRHQLTVRSTPQQNGVAERKNRIIMELV 361
           E ES   LK+LRSDRGGEY+   F  FLK++GI+HQ T+R TPQQNGVAERKNRIIMEL 
Sbjct: 554 ENESNLKLKSLRSDRGGEYI--VFADFLKENGIKHQKTLRRTPQQNGVAERKNRIIMELA 611

Query: 362 RSMLKTKGLPKMFWAEAIACACYVLNRAPTKSVQGKTP 475
           RSMLK K LP  FW +A+ CA Y+LNRA TKSVQG TP
Sbjct: 612 RSMLKAKKLPDQFWGDAVTCAVYLLNRASTKSVQGITP 649


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  231 bits (589), Expect = 5e-59
 Identities = 107/158 (67%), Positives = 133/158 (84%)
 Frame = +2

Query: 2   AKKPLELVHSDLCGPMRTSSIGGSRYFLTFIDDYSRKMWIYFLKEKSQVFEVFKDFKAYV 181
           A+KPLEL+H+D+CGP++  S+G S YFL FIDD+SRK W+YFLKEKS+VFE+FK FKA+V
Sbjct: 523 AQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHV 582

Query: 182 EKESGRSLKTLRSDRGGEYMSEEFGSFLKKHGIRHQLTVRSTPQQNGVAERKNRIIMELV 361
           EKESG  +KT+RSDRGGE+ S+EF  + + +GIR QLTV  +PQQNGV ERKNR I+E+ 
Sbjct: 583 EKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMA 642

Query: 362 RSMLKTKGLPKMFWAEAIACACYVLNRAPTKSVQGKTP 475
           RSMLK+K LPK  WAEA+ACA Y+LNR+PTKSV GKTP
Sbjct: 643 RSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTP 680


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  231 bits (589), Expect = 5e-59
 Identities = 107/158 (67%), Positives = 133/158 (84%)
 Frame = +2

Query: 2   AKKPLELVHSDLCGPMRTSSIGGSRYFLTFIDDYSRKMWIYFLKEKSQVFEVFKDFKAYV 181
           A+KPLEL+H+D+CGP++  S+G S YFL FIDD+SRK W+YFLKEKS+VFE+FK FKA+V
Sbjct: 523 AQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHV 582

Query: 182 EKESGRSLKTLRSDRGGEYMSEEFGSFLKKHGIRHQLTVRSTPQQNGVAERKNRIIMELV 361
           EKESG  +KT+RSDRGGE+ S+EF  + + +GIR QLTV  +PQQNGV ERKNR I+E+ 
Sbjct: 583 EKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMA 642

Query: 362 RSMLKTKGLPKMFWAEAIACACYVLNRAPTKSVQGKTP 475
           RSMLK+K LPK  WAEA+ACA Y+LNR+PTKSV GKTP
Sbjct: 643 RSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTP 680


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
           thaliana]
          Length = 1272

 Score =  230 bits (587), Expect = 8e-59
 Identities = 107/158 (67%), Positives = 133/158 (84%)
 Frame = +2

Query: 2   AKKPLELVHSDLCGPMRTSSIGGSRYFLTFIDDYSRKMWIYFLKEKSQVFEVFKDFKAYV 181
           A+KPLEL+H+D+CGP++  S+G S YFL FIDD+SRK W+YFLKEKS+VFE+FK FKA+V
Sbjct: 523 AQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHV 582

Query: 182 EKESGRSLKTLRSDRGGEYMSEEFGSFLKKHGIRHQLTVRSTPQQNGVAERKNRIIMELV 361
           EKESG  +KT+RSD GGE+ S+EF  + + +GIR QLTV  +PQQNGVAERKNR I+E+ 
Sbjct: 583 EKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMA 642

Query: 362 RSMLKTKGLPKMFWAEAIACACYVLNRAPTKSVQGKTP 475
           RSMLK+K LPK  WAEA+ACA Y+LNR+PTKSV GKTP
Sbjct: 643 RSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTP 680


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