BLASTX nr result

ID: Angelica23_contig00034394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00034394
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196175.1| anaphase-promoting complex subunit 1 [Arabidops...    63   2e-08
ref|XP_002871168.1| hypothetical protein ARALYDRAFT_487351 [Arab...    62   5e-08
ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subuni...    59   4e-07
emb|CBI25461.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|NP_196175.1| anaphase-promoting complex subunit 1 [Arabidopsis thaliana]
           gi|75170223|sp|Q9FFF9.1|APC1_ARATH RecName:
           Full=Anaphase-promoting complex subunit 1; AltName:
           Full=Cyclosome subunit 1; AltName: Full=Protein EMBRYO
           DEFECTIVE 2771 gi|10178133|dbj|BAB11545.1| meiotic check
           point regulator-like protein [Arabidopsis thaliana]
           gi|332003506|gb|AED90889.1| anaphase-promoting complex
           subunit 1 [Arabidopsis thaliana]
          Length = 1678

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/72 (48%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = +2

Query: 2   CLTTYNISGETVSVPLSRPVVSIWPLPSGLLL-QVAKGNXXXXXXXXXXXXXXXXRDMLR 178
           CLT YN SGE VSVPL R V SIWPLP GLLL Q  + N                R+MLR
Sbjct: 110 CLTIYNTSGEVVSVPLMRTVKSIWPLPCGLLLEQAGEVNPPSHVPFSPVSPILGSREMLR 169

Query: 179 AKRDMKGYSPQN 214
            ++++   SPQN
Sbjct: 170 QRKEVGNSSPQN 181


>ref|XP_002871168.1| hypothetical protein ARALYDRAFT_487351 [Arabidopsis lyrata subsp.
           lyrata] gi|297317005|gb|EFH47427.1| hypothetical protein
           ARALYDRAFT_487351 [Arabidopsis lyrata subsp. lyrata]
          Length = 1748

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/94 (41%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   CLTTYNISGETVSVPLSRPVVSIWPLPSGLLLQVA-KGNXXXXXXXXXXXXXXXXRDMLR 178
           CLT YN SGE VSVPL R V SIW LP GLLLQ A + N                R+MLR
Sbjct: 113 CLTIYNTSGEVVSVPLPRTVKSIWSLPYGLLLQQATEVNPASHVPFSSVSPILSSREMLR 172

Query: 179 AKRDMKGYSPQNLFFTSQYXXXXXXXXXXXXHLI 280
            K+++   SPQN      +            HLI
Sbjct: 173 QKKEVGNSSPQNFHSPGTHDLNKRDMPYMSSHLI 206


>ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subunit 1-like [Vitis
           vinifera]
          Length = 1716

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = +2

Query: 5   LTTYNISGETVSVPLSRPVVSIWPLPSGLLLQVA-KGNXXXXXXXXXXXXXXXXRDMLRA 181
           LT YN SGE VS+PL+R V SIWPLP GLLLQ A +G                 RD+ R 
Sbjct: 119 LTIYNTSGEVVSIPLARTVTSIWPLPFGLLLQQATEGISPAHLPFSSSSPLLGGRDITRP 178

Query: 182 KRDMKGYSPQNLF 220
           KR++ G+SP+  F
Sbjct: 179 KREI-GHSPRQNF 190


>emb|CBI25461.3| unnamed protein product [Vitis vinifera]
          Length = 1931

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = +2

Query: 5   LTTYNISGETVSVPLSRPVVSIWPLPSGLLLQVA-KGNXXXXXXXXXXXXXXXXRDMLRA 181
           LT YN SGE VS+PL+R V SIWPLP GLLLQ A +G                 RD+ R 
Sbjct: 119 LTIYNTSGEVVSIPLARTVTSIWPLPFGLLLQQATEGISPAHLPFSSSSPLLGGRDITRP 178

Query: 182 KRDMKGYSPQNLF 220
           KR++ G+SP+  F
Sbjct: 179 KREI-GHSPRQNF 190


>ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|222851985|gb|EEE89532.1|
           predicted protein [Populus trichocarpa]
          Length = 1929

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/72 (45%), Positives = 40/72 (55%)
 Frame = +2

Query: 5   LTTYNISGETVSVPLSRPVVSIWPLPSGLLLQVAKGNXXXXXXXXXXXXXXXXRDMLRAK 184
           LT YNISGE VS+P+   + SIWPLP GLLLQ A  N                 DM RAK
Sbjct: 119 LTIYNISGEVVSIPIPCTITSIWPLPFGLLLQSASENSPMQNHLSSPSPLFGVCDMSRAK 178

Query: 185 RDMKGYSPQNLF 220
           R++  +SP + F
Sbjct: 179 REIV-HSPHHNF 189


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