BLASTX nr result

ID: Angelica23_contig00034280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00034280
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517967.1| conserved hypothetical protein [Ricinus comm...    65   7e-09
gb|ABE01833.1| CK25 [Nicotiana tabacum]                                62   9e-08
ref|XP_003593490.1| hypothetical protein MTR_2g012750 [Medicago ...    60   4e-07
ref|XP_002305008.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002310042.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06

>ref|XP_002517967.1| conserved hypothetical protein [Ricinus communis]
           gi|223542949|gb|EEF44485.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 306

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 47/117 (40%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
 Frame = +1

Query: 52  QGRNNTTPHRRNMGPTSGAVRRDSGEVSLRRSRSPAPRGERSGPGGKSVGQKGATGKSVT 231
           Q R   T + +     S  V RD GE S RRSRSPA R      GG   G+ G +   VT
Sbjct: 195 QSRRTATNNNQRSNVGSSRVGRDLGERSGRRSRSPATRAT----GGVVKGRGGGSPAKVT 250

Query: 232 GEAGCKSPVRKVDESQRKVEKQDDGVSG---------ENGSESLENPLVSLECFIFL 375
           G+AG  +    V   + +V+K++ G +          + G+ESL NPLVSLECFIFL
Sbjct: 251 GKAGGGAAEEGVGV-ESEVKKEEKGKNNSVLMQQQQQQEGNESLGNPLVSLECFIFL 306


>gb|ABE01833.1| CK25 [Nicotiana tabacum]
          Length = 291

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 48/114 (42%), Positives = 60/114 (52%)
 Frame = +1

Query: 34  SSRPVNQGRNNTTPHRRNMGPTSGAVRRDSGEVSLRRSRSPAPRGERSGPGGKSVGQKGA 213
           SSR V QGR  T   RRN+GP +G  R+   +  +RRS+ PA RG              A
Sbjct: 183 SSRGV-QGRGMTA-QRRNVGPPNGT-RKGPIDNGVRRSKPPATRGPVEQRRNVRYRSPAA 239

Query: 214 TGKSVTGEAGCKSPVRKVDESQRKVEKQDDGVSGENGSESLENPLVSLECFIFL 375
             +   G       V   +ES  + EK  + VS E+G ESLENPLVS+ECFIFL
Sbjct: 240 REEEKLGGQSLARNVEN-EESNSRAEKPKEEVSPESG-ESLENPLVSMECFIFL 291


>ref|XP_003593490.1| hypothetical protein MTR_2g012750 [Medicago truncatula]
           gi|355482538|gb|AES63741.1| hypothetical protein
           MTR_2g012750 [Medicago truncatula]
          Length = 265

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 45/121 (37%), Positives = 61/121 (50%)
 Frame = +1

Query: 13  GGGQVVRSSRPVNQGRNNTTPHRRNMGPTSGAVRRDSGEVSLRRSRSPAPRGERSGPGGK 192
           G  ++V+    +  G     PHRR           D+GEVS RRSRSPA R + +G    
Sbjct: 162 GSSRIVQRRDQMGNGGIKNQPHRR-----------DAGEVSGRRSRSPATRTD-NGSTRS 209

Query: 193 SVGQKGATGKSVTGEAGCKSPVRKVDESQRKVEKQDDGVSGENGSESLENPLVSLECFIF 372
            VG+  +  K  T ++  K      +   RK+E +    + +   ESLENPLVSLECFIF
Sbjct: 210 VVGRSLSARK--TNQSPGKGRTAVPENGGRKMESKWPSTAND---ESLENPLVSLECFIF 264

Query: 373 L 375
           L
Sbjct: 265 L 265


>ref|XP_002305008.1| predicted protein [Populus trichocarpa] gi|222847972|gb|EEE85519.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 51/157 (32%), Positives = 70/157 (44%), Gaps = 32/157 (20%)
 Frame = +1

Query: 1   RSKRGGGQVVRSSRPVNQGRNNTT----PHRRNMGPTSGAVR------RDSGEVSLRRSR 150
           R++  G  V R  R V +     T    P +RN     G+VR        SG+  +RR  
Sbjct: 164 RNRVLGELVPRKDRVVGKSPTRRTTEQSPSKRNGAINGGSVRLVQSREMGSGQAGVRRGS 223

Query: 151 SPAPRGERSGPGGKSVGQKGATGKSVTGEAGCKSP-VRKVDESQRKVEKQ---------- 297
            P P+    G G     +  AT +SV G    +SP  R+ ++S  +V K+          
Sbjct: 224 RPDPKKRDPGEGSARRSRSPATNRSVMG----RSPSTRRTNQSPGRVRKEAHEGVGNGNM 279

Query: 298 DDGV-----------SGENGSESLENPLVSLECFIFL 375
           D+G+           +G    ESLENPLVSLECFIFL
Sbjct: 280 DNGMEAKWPSTSNVANGTTNDESLENPLVSLECFIFL 316


>ref|XP_002310042.1| predicted protein [Populus trichocarpa] gi|222852945|gb|EEE90492.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/103 (42%), Positives = 54/103 (52%)
 Frame = +1

Query: 67  TTPHRRNMGPTSGAVRRDSGEVSLRRSRSPAPRGERSGPGGKSVGQKGATGKSVTGEAGC 246
           T   +RN+G  S  VRRD G       RSP  R      GG   G+ G++   VTGEAG 
Sbjct: 179 TAAGQRNVG--SSGVRRDFG-------RSPGTRTA----GGVGRGRVGSSPGKVTGEAGG 225

Query: 247 KSPVRKVDESQRKVEKQDDGVSGENGSESLENPLVSLECFIFL 375
           +S  RK +E+             + G+ESLENPLVSLE FIFL
Sbjct: 226 RSVERKKEETVNGTVLMQQQ---QEGNESLENPLVSLEGFIFL 265


Top