BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00034188
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...    72   5e-11
ref|XP_003518269.1| PREDICTED: uncharacterized protein LOC100777...    68   9e-10
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    60   2e-07

>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 49/131 (37%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
 Frame = +3

Query: 135 PH-AQQAQQFSPPCPYPTTSARKN*AQNSTQGLLGSRPNQAY-----QAAYTPTDIEQAL 296
           PH  QQ     PP  Y T       A N   GLLGS P  A      Q    P ++  A 
Sbjct: 235 PHWPQQNWMQRPPMAYLT-------ATNPAAGLLGSSPQAAMVGSTNQLTQIPANLAAAF 287

Query: 297 YTMSLQQP-DPTLYMDTGATTTMTNEQGDFLSFFNNCTSQNIVVDNGDSIPVLGQGTKYL 473
            T ++  P D + YMDTGATT +T + G   S FN+ +S ++VV NG S+P    G  +L
Sbjct: 288 GTTTMPDPTDASWYMDTGATTHLTAQPGTLHSLFNSSSSPSVVVGNGSSVPTKAIGYSFL 347

Query: 474 PKPFPPFVLKN 506
           P    P  L N
Sbjct: 348 PSKIRPLHLHN 358


>ref|XP_003518269.1| PREDICTED: uncharacterized protein LOC100777373 [Glycine max]
          Length = 3038

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 12/79 (15%)
 Frame = +3

Query: 165 PPCPYPTTS-ARKN*A------QNSTQGLLGSRPNQAYQA-----AYTPTDIEQALYTMS 308
           PPCPYP +S A KN        + S  G+LG RP QAY A     +YTPTDIE A++ +S
Sbjct: 270 PPCPYPASSWALKNVVTPTVGPRQSRPGILGLRP-QAYNAIAPPTSYTPTDIEAAMHALS 328

Query: 309 LQQPDPTLYMDTGATTTMT 365
             QPD   YMDTGAT+ M+
Sbjct: 329 FSQPDGNFYMDTGATSHMS 347


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 53/173 (30%), Positives = 69/173 (39%), Gaps = 19/173 (10%)
 Frame = +3

Query: 45  GRGRFSFYNNQGXXXXXXXXXXXXXXXRTAPHAQQAQQFSPPCPYPTTSARKN*AQNSTQ 224
           GRGR   YNN                 +  P     Q       YPT         N+  
Sbjct: 253 GRGR---YNNNWSYNQFSSPWTYNNQWQHPPFYAPMQPPQQHTGYPTFGQGPFQPTNAAH 309

Query: 225 -GLLGSRPNQAYQAAYT----------------PTDIEQALYTMSLQQPDPTLYMDTGAT 353
            G+LG  P+Q   AA+                 P  +  A  TM+LQ+PDP  YMD+ AT
Sbjct: 310 PGILGPHPSQPTHAAHMANVYPYPTPSAPMSQLPPGLIHAFNTMTLQEPDPNWYMDSAAT 369

Query: 354 TTMTNEQGDFLSFFNNCTSQNIVVDNGDSIPV--LGQGTKYLPKPFPPFVLKN 506
           + +T+  G+  S FN  T   + V NG   PV  +G GT  L  P   F L+N
Sbjct: 370 SHITSNIGNLQSTFNTSTMPLVTVGNGSLAPVETIGHGT--LSYPSRSFSLRN 420