BLASTX nr result

ID: Angelica23_contig00034146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00034146
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28799.3| unnamed protein product [Vitis vinifera]              187   3e-45
ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t...   182   1e-43
tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea m...   152   1e-34
dbj|BAD31028.1| polymyositis/scleroderma autoantigen 2 -like [Or...   149   1e-33
gb|EEE67258.1| hypothetical protein OsJ_24424 [Oryza sativa Japo...   149   1e-33

>emb|CBI28799.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  187 bits (476), Expect = 3e-45
 Identities = 113/286 (39%), Positives = 146/286 (51%), Gaps = 1/286 (0%)
 Frame = -3

Query: 1055 RQIVMKYYGGRKISQEDLERALVVGMSPHERRRAAKKRGLSFKHVVTANEQGNSGNWTSF 876
            RQ VMKYYGGR+I++EDLE+AL+VGMSPHER+R  +K+G+S KH   A            
Sbjct: 699  RQTVMKYYGGREITEEDLEKALLVGMSPHERKRLERKKGMSLKHSKGA------------ 746

Query: 875  TPENDLGTNNEKDNRNGTSSTTGDCLDTNLVDNSHELHSEMGSNEPKNTGNRTSYAHEDD 696
                  G  N++   N  S      + T+ +DN+ ++  E G N  K             
Sbjct: 747  ------GFPNKEQESNARS------MGTSPIDNALKVDGEGGLNTTK------------- 781

Query: 695  LNAHMGDSSLAVERGTSCNSGGN-SPTHFTAKVYLEGSVTDSMSTNSGKIIPGTCLESEV 519
                          G +C    N +    T +V    S   S   +    +   C+    
Sbjct: 782  --------------GEACGKQENGNDLEITMEVLASDSNNLSSDRSETSEMKDMCVMDTD 827

Query: 518  SSECNGTLDGTASECNGTLNGTXXXXXXXXXXXLGHGPHGNQVVNHLLKEYGDDGIQEFC 339
            + E     +GT        NG            LGHGPHG +VV+HLLKEYG+DGI++FC
Sbjct: 828  NCESRSQSEGTLDLFYPKSNGNASPKHNPKLSLLGHGPHGKEVVDHLLKEYGEDGIRQFC 887

Query: 338  KRWRQVFVDAIKPRFLPAGWDVTHSGRRDFGDFSVYNPAKKGSAAA 201
            +RWRQ FV+AI PRFLPAGWDV HSGRRDFG+FSVYNP KK  A A
Sbjct: 888  QRWRQTFVEAIHPRFLPAGWDVMHSGRRDFGEFSVYNPDKKAFAPA 933


>ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
            gi|355506989|gb|AES88131.1| Exosome complex exonuclease
            RRP6 [Medicago truncatula]
          Length = 974

 Score =  182 bits (462), Expect = 1e-43
 Identities = 119/285 (41%), Positives = 159/285 (55%), Gaps = 3/285 (1%)
 Frame = -3

Query: 1052 QIVMKYYGGRKISQEDLERALVVGMSPHERRRAAKKRGLSFKHVV-TANEQGNSGNWTSF 876
            +I+  YYGGR+IS+EDLE+AL VGM+PHERR+  KKRG+S KH   +A+     GN T +
Sbjct: 732  EIIKTYYGGREISKEDLEKALQVGMTPHERRKFEKKRGVSSKHSTGSASAVPYEGNDTDY 791

Query: 875  TPENDLGTNNEKDNRNGTSSTTGDCLDTNLVDNSHELHSEMGSNEPKNTGNRTSYAHEDD 696
             P    G +N            GD L  + +D S+        NE   +G+      +DD
Sbjct: 792  AP----GMSN------------GDTLKVDTLDGSYV-------NEETRSGDN----RQDD 824

Query: 695  LNAHMGDSSLAVERGTSCNSGGNSPTHFTAKVYLEGSVTDSMSTNSG--KIIPGTCLESE 522
                   S LAV++ TS    GN+    T     + +    + T+    K+ P    + E
Sbjct: 825  SGKPSLASDLAVDKATS---NGNTIVVKTTDHDDDETSYSLVDTDESLNKMQPNVVSDEE 881

Query: 521  VSSECNGTLDGTASECNGTLNGTXXXXXXXXXXXLGHGPHGNQVVNHLLKEYGDDGIQEF 342
               +     D T ++ +  L+             LGHGPHG QVV+HLLKEYG+DGI+EF
Sbjct: 882  SIKD----EDTTQAKHHSKLS------------LLGHGPHGKQVVDHLLKEYGEDGIREF 925

Query: 341  CKRWRQVFVDAIKPRFLPAGWDVTHSGRRDFGDFSVYNPAKKGSA 207
            C+RWRQVFVDA+KPRFLP GWDV HSGRRDFG+FSVYN  K+ +A
Sbjct: 926  CQRWRQVFVDALKPRFLPGGWDVKHSGRRDFGEFSVYNHQKRETA 970


>tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
          Length = 960

 Score =  152 bits (385), Expect = 1e-34
 Identities = 103/293 (35%), Positives = 141/293 (48%), Gaps = 8/293 (2%)
 Frame = -3

Query: 1052 QIVMKYYGGRKISQEDLERALVVGMSPHERRRAAKKRGLSFKHVVTANEQGNSGNWTSFT 873
            QIV  YYGGR ++ EDLE AL+VGMSPHERRR  KK+G SF+       + +S N  S  
Sbjct: 717  QIVKSYYGGRDVTPEDLEMALLVGMSPHERRRLEKKKGYSFRAQAQTIIRKSSSNTIS-- 774

Query: 872  PENDLGTNNEKDNRNGTSSTTGDCLDTNLVDNSHELHSEM--------GSNEPKNTGNRT 717
                      +D+ +G+             +N H L +          G  E   TGN+ 
Sbjct: 775  ----------EDSGHGS-------------ENCHALSARFPEVGTGSNGQQEFDETGNQN 811

Query: 716  SYAHEDDLNAHMGDSSLAVERGTSCNSGGNSPTHFTAKVYLEGSVTDSMSTNSGKIIPGT 537
                 ++L    G SSL V    + +       H T  V LE   TD+     G   PG 
Sbjct: 812  QL---ENLTLSQGSSSLPVSMEDTTSD------HDT--VTLE---TDTEQQARGACTPGN 857

Query: 536  CLESEVSSECNGTLDGTASECNGTLNGTXXXXXXXXXXXLGHGPHGNQVVNHLLKEYGDD 357
              + +  S C+ +    +                     LGHG HG QVV  L    G++
Sbjct: 858  SHDDKEQSICDNSSQVISKNAE-------------KISLLGHGHHGKQVVELLFSNGGEE 904

Query: 356  GIQEFCKRWRQVFVDAIKPRFLPAGWDVTHSGRRDFGDFSVYNPAKKGSAAAT 198
             + +FC+RWRQ+FV+A+ PR+LP+GW++ HSGRRDFGDFSVY P +K   +AT
Sbjct: 905  FVNQFCQRWRQIFVEAVHPRYLPSGWNINHSGRRDFGDFSVYKPPRKDPQSAT 957


>dbj|BAD31028.1| polymyositis/scleroderma autoantigen 2 -like [Oryza sativa Japonica
            Group] gi|50509503|dbj|BAD31184.1|
            polymyositis/scleroderma autoantigen 2 -like [Oryza
            sativa Japonica Group]
          Length = 1031

 Score =  149 bits (376), Expect = 1e-33
 Identities = 105/287 (36%), Positives = 140/287 (48%), Gaps = 4/287 (1%)
 Frame = -3

Query: 1052 QIVMKYYGGRKISQEDLERALVVGMSPHERRRAAKKRGLSFKHVVTANEQGNSGNWTSFT 873
            QIV  YYGGR ++ EDLE AL+VGMSP+ERRR +KK G S++          + N    +
Sbjct: 770  QIVKSYYGGRDVTPEDLEMALLVGMSPNERRRHSKKNGFSYR--------SQAQNVIRKS 821

Query: 872  PENDLGTNNEKDNRNGTSSTTGDCLDTNLVDNSHELHSEMGSNEPKNTGNRTSYAHEDDL 693
              N +  NNE D  NG                    ++E  S   KN     S+   D+ 
Sbjct: 822  NSNGIVENNEHDPENG--------------------YAEQFS---KNGVENNSHPDIDEN 858

Query: 692  NAHMGDSSLAVERGTSCNSGGNS---PTHFTAKVYLEGSVTDSMSTNSGKIIPGTCLESE 522
            N  +G      + G    SGGN    PT           + + +S +S  I   T  ++ 
Sbjct: 859  NNQLGIDEHTSQPG----SGGNKIHGPTLSKESTIYPPRMANPISDSS--IEADTVQQAS 912

Query: 521  VSSE-CNGTLDGTASECNGTLNGTXXXXXXXXXXXLGHGPHGNQVVNHLLKEYGDDGIQE 345
            +     NG LD      N + N             LGHG HG QVV  LL   G++ I +
Sbjct: 913  LGGNPANGDLDRDPCGSNNS-NQAIPQNGDKKISLLGHGHHGKQVVELLLSNGGEEAINQ 971

Query: 344  FCKRWRQVFVDAIKPRFLPAGWDVTHSGRRDFGDFSVYNPAKKGSAA 204
            F +RWRQVFV ++ PR+LP+GW++ HSGRRDFGDFSVY P+KK  AA
Sbjct: 972  FSQRWRQVFVASLHPRYLPSGWNIKHSGRRDFGDFSVYKPSKKPPAA 1018


>gb|EEE67258.1| hypothetical protein OsJ_24424 [Oryza sativa Japonica Group]
          Length = 949

 Score =  149 bits (376), Expect = 1e-33
 Identities = 105/287 (36%), Positives = 140/287 (48%), Gaps = 4/287 (1%)
 Frame = -3

Query: 1052 QIVMKYYGGRKISQEDLERALVVGMSPHERRRAAKKRGLSFKHVVTANEQGNSGNWTSFT 873
            QIV  YYGGR ++ EDLE AL+VGMSP+ERRR +KK G S++          + N    +
Sbjct: 688  QIVKSYYGGRDVTPEDLEMALLVGMSPNERRRHSKKNGFSYR--------SQAQNVIRKS 739

Query: 872  PENDLGTNNEKDNRNGTSSTTGDCLDTNLVDNSHELHSEMGSNEPKNTGNRTSYAHEDDL 693
              N +  NNE D  NG                    ++E  S   KN     S+   D+ 
Sbjct: 740  NSNGIVENNEHDPENG--------------------YAEQFS---KNGVENNSHPDIDEN 776

Query: 692  NAHMGDSSLAVERGTSCNSGGNS---PTHFTAKVYLEGSVTDSMSTNSGKIIPGTCLESE 522
            N  +G      + G    SGGN    PT           + + +S +S  I   T  ++ 
Sbjct: 777  NNQLGIDEHTSQPG----SGGNKIHGPTLSKESTIYPPRMANPISDSS--IEADTVQQAS 830

Query: 521  VSSE-CNGTLDGTASECNGTLNGTXXXXXXXXXXXLGHGPHGNQVVNHLLKEYGDDGIQE 345
            +     NG LD      N + N             LGHG HG QVV  LL   G++ I +
Sbjct: 831  LGGNPANGDLDRDPCGSNNS-NQAIPQNGDKKISLLGHGHHGKQVVELLLSNGGEEAINQ 889

Query: 344  FCKRWRQVFVDAIKPRFLPAGWDVTHSGRRDFGDFSVYNPAKKGSAA 204
            F +RWRQVFV ++ PR+LP+GW++ HSGRRDFGDFSVY P+KK  AA
Sbjct: 890  FSQRWRQVFVASLHPRYLPSGWNIKHSGRRDFGDFSVYKPSKKPPAA 936


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