BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00033475
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             103   1e-20
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...    99   6e-19
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                97   2e-18
gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    96   3e-18
gb|AAX96424.1| retrotransposon protein, putative, Ty3-gypsy sub-...    95   9e-18

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/148 (39%), Positives = 87/148 (58%)
 Frame = -1

Query: 514  ISFSNADFEGINPNHNEALIVSLDITDNDVKRILVDNGSSVNILFKHILDRMQLGSVKVN 335
            ISF++ D EG++  HN+ L+V L I+D+ V R+L+D GSSV+++FK +L  M +   ++ 
Sbjct: 600  ISFTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIK 659

Query: 334  ECREAPLYGFGNNLVPIQGTLYLPVMFGTLPK*VTHTVKFYVINTPSSYNGILGRPALSQ 155
               + PL GF  + V   GT+ LP+  G L       VKF VI  P+ YN ILG P + Q
Sbjct: 660  PVSK-PLAGFDGDFVMTIGTIKLPIFVGGL----IAWVKFVVIGKPAVYNVILGTPWIHQ 714

Query: 154  LRAVTSTPHLKFKFPTPVGTGEVKGDSE 71
            ++A+ ST H   KFPT  G   ++   E
Sbjct: 715  MQAIPSTYHQCVKFPTHNGIFTLRAPKE 742


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 51/150 (34%), Positives = 87/150 (58%)
 Frame = -1

Query: 514 ISFSNADFEGINPNHNEALIVSLDITDNDVKRILVDNGSSVNILFKHILDRMQLGSVKVN 335
           ++F++ D  G++  HN+ L++ L I +++V RIL+D GSSVN++FK +L +M++    + 
Sbjct: 330 LTFTSEDLFGVDLPHNDPLVIELHIGESEVTRILIDTGSSVNVVFKDVLQKMKVHDRHIK 389

Query: 334 ECREAPLYGFGNNLVPIQGTLYLPVMFGTLPK*VTHTVKFYVINTPSSYNGILGRPALSQ 155
                PL GF  N +   GT+ LP+  G          KF V++ P+ YN ILG P +  
Sbjct: 390 P-SVRPLTGFDGNTMMTNGTIKLPIYLGG----AATWHKFVVVDKPTIYNIILGTPWIHD 444

Query: 154 LRAVTSTPHLKFKFPTPVGTGEVKGDSEMA 65
           ++A+ S+ H   K PT +G   ++G+  +A
Sbjct: 445 MQAIPSSYHQCIKIPTSIGIETIRGNQNLA 474


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 54/172 (31%), Positives = 97/172 (56%), Gaps = 1/172 (0%)
 Frame = -1

Query: 514  ISFSNADFEGINPNHNEALIVSLDITDNDVKRILVDNGSSVNILFKHILDRMQLGSVKVN 335
            I+F++ DF  I+P+ ++ ++++++I    + ++LVD GSSV+IL+     +M++   ++ 
Sbjct: 622  ITFTDEDFTAIDPSQDDPMVITVEIDKFAIAKVLVDQGSSVDILYWETFKKMKIPEAEIQ 681

Query: 334  ECREAPLYGFGNNLVPIQGTLYLPVMFGTLPK*VTHTVKFYVINTPSSYNGILGRPALSQ 155
               E  + GF    V  +G + L   FG      T  +++ ++N  +SYN +LGRP++++
Sbjct: 682  PYNEQ-IVGFSRERVDTKGFIDLYTTFGDDYLSKTINIRYLLVNANTSYNILLGRPSINR 740

Query: 154  LRAVTSTPHLKFKFPTPVG-TGEVKGDSEMAGRCYGQALIMAETDPEYKRKA 2
            L+A+ STPHL  KFP+  G    V  D + A  CY  +L +  T   Y   A
Sbjct: 741  LKAIVSTPHLAMKFPSVNGDIATVHIDQKTARECYVASLKVEPTRRLYTTSA 792


>gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 59/171 (34%), Positives = 96/171 (56%), Gaps = 6/171 (3%)
 Frame = -1

Query: 547 VMMVRSFPEQI------ISFSNADFEGINPNHNEALIVSLDITDNDVKRILVDNGSSVNI 386
           V++  S  E+I      ISF+  +   +   H++AL+++LD+ + +V RIL+D GSSV++
Sbjct: 498 VLLKASLSEEIDFQGASISFNEEETRHLERPHDDALVITLDVANFEVSRILIDTGSSVDL 557

Query: 385 LFKHILDRMQLGSVKVNECREAPLYGFGNNLVPIQGTLYLPVMFGTLPK*VTHTVKFYVI 206
           +F   L++M +    +     +PL  F +      GT+ LPV    L K V+  V F V 
Sbjct: 558 IFLSTLEKMGISRGDIVG-PPSPLVAFTSESAMSLGTIKLPV----LAKKVSKIVDFVVF 612

Query: 205 NTPSSYNGILGRPALSQLRAVTSTPHLKFKFPTPVGTGEVKGDSEMAGRCY 53
           + P++YN ILG P + +++AV ST +   KFPT  G   ++GD E +  CY
Sbjct: 613 DKPAAYNIILGTPWIYRMKAVPSTYYQCIKFPTSNGVETIRGDQEASRTCY 663


>gb|AAX96424.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
          Length = 1587

 Score = 94.7 bits (234), Expect = 9e-18
 Identities = 53/147 (36%), Positives = 81/147 (55%)
 Frame = -1

Query: 520  QIISFSNADFEGINPNHNEALIVSLDITDNDVKRILVDNGSSVNILFKHILDRMQLGSVK 341
            Q+ISF   D EG+  +H + L++S +I   +V+RILVD GSS +++F     +M+L +  
Sbjct: 581  QLISFGPEDAEGVMFSHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMELPTQT 640

Query: 340  VNECREAPLYGFGNNLVPIQGTLYLPVMFGTLPK*VTHTVKFYVINTPSSYNGILGRPAL 161
            +     A L GFG   V + G   L + FG+        + F V++ P +YN I GR  L
Sbjct: 641  LTPA-PASLRGFGGEAVQVLGQALLLIAFGSGENGREEQILFDVVDIPYNYNAIFGRATL 699

Query: 160  SQLRAVTSTPHLKFKFPTPVGTGEVKG 80
            ++  AV+   +LK K P+P G   VKG
Sbjct: 700  NKFEAVSHHNYLKLKMPSPAGVIVVKG 726