BLASTX nr result

ID: Angelica23_contig00033376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00033376
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]    92   4e-17
ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
ref|XP_002533788.1| pentatricopeptide repeat-containing protein,...    76   3e-12
ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    61   1e-07

>emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]
          Length = 444

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 KAEALIKQGQKAGVFGKMSKEMVYSTFLP-LHEKETSYLETVSPCGKSDLADSLAREMSK 132
           +A+AL+KQ +KAG+   +S EMV +T L  + +K   +  T +   KS LA+SL REM K
Sbjct: 222 EAKALLKQMRKAGLIVDLSDEMVMTTCLSGVVDKNRMHTRTSTSIWKSGLAESLVREMKK 281

Query: 131 EQGETLFVVNELNSSIYFFMKANMIDDAMKAYRRMQEMRIHPT 3
           ++   L VV + NSSIYFF KA MIDDA++ Y RMQEM+I PT
Sbjct: 282 QEKAILPVVYKFNSSIYFFCKAKMIDDALRIYGRMQEMKIEPT 324


>ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 46/102 (45%), Positives = 62/102 (60%)
 Frame = -3

Query: 308 KAEALIKQGQKAGVFGKMSKEMVYSTFLPLHEKETSYLETVSPCGKSDLADSLAREMSKE 129
           +A+AL+++ +KAG    +S EMV +  L       S     S   KSDL D L REM +E
Sbjct: 485 EAKALLRKMRKAGFVVNLSDEMVATACLSEAANNAS-----SSSSKSDLIDFLIREMREE 539

Query: 128 QGETLFVVNELNSSIYFFMKANMIDDAMKAYRRMQEMRIHPT 3
           +     V  ELNSSIY+F KA M++DA+K Y+RMQ M+I PT
Sbjct: 540 EKAIPSVGYELNSSIYYFCKAKMMEDALKTYKRMQHMKIQPT 581


>ref|XP_002533788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526289|gb|EEF28601.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 689

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 47/102 (46%), Positives = 64/102 (62%)
 Frame = -3

Query: 308 KAEALIKQGQKAGVFGKMSKEMVYSTFLPLHEKETSYLETVSPCGKSDLADSLAREMSKE 129
           +A+AL++Q +KAG+   +S EMV  T L      +S     S   KSDLAD + +E ++E
Sbjct: 474 EADALVRQLRKAGLIKNLSVEMVAFTSLLERADNSS-----SSLSKSDLADFIIQE-TRE 527

Query: 128 QGETLFVVNELNSSIYFFMKANMIDDAMKAYRRMQEMRIHPT 3
           + E    V+ELNSSIYFF KA M+ DA+K YR+MQ   I PT
Sbjct: 528 EKEVTPTVHELNSSIYFFCKAKMMGDALKIYRKMQMKGIQPT 569


>ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g17616-like [Glycine max]
          Length = 684

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/103 (39%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 KAEALIKQGQKAGVFGKMSKEMVYSTFLPLHEKETSYLETVSPCGKSDLADSLAREMSKE 129
           + +AL+KQ +K G+   +S + +        ++     ET++  GK+DLA +L  ++ K+
Sbjct: 471 ETKALLKQMKKVGLDKGLSDDAI--------DEHNLCEETLNSLGKADLAIALV-QILKD 521

Query: 128 QGETLF-VVNELNSSIYFFMKANMIDDAMKAYRRMQEMRIHPT 3
           + +T+F +V  LNSSI+FF KA MI+DA++AYRRM +M+I PT
Sbjct: 522 EDQTVFPLVYNLNSSIFFFCKAGMIEDALRAYRRMVDMKIQPT 564


>ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g17616-like, partial [Vitis vinifera]
          Length = 457

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 43/102 (42%), Positives = 52/102 (50%)
 Frame = -3

Query: 308 KAEALIKQGQKAGVFGKMSKEMVYSTFLPLHEKETSYLETVSPCGKSDLADSLAREMSKE 129
           +A+AL+KQ +KAG    +S EMV +T L   EK      T+ P                 
Sbjct: 265 EAKALLKQMRKAGFVVDLSDEMVMTTCLLGVEK------TILP----------------- 301

Query: 128 QGETLFVVNELNSSIYFFMKANMIDDAMKAYRRMQEMRIHPT 3
                 VV E NSSIYFF KA  IDDA++ YRRMQE  I PT
Sbjct: 302 ------VVYEFNSSIYFFCKAKKIDDALRIYRRMQETEIEPT 337


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