BLASTX nr result

ID: Angelica23_contig00033358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00033358
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   140   8e-32
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   139   3e-31
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   139   3e-31
emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]   139   3e-31
ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-l...   132   3e-29

>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/120 (56%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
 Frame = -3

Query: 355 PPLQNQHAYHNMLSSVSQGNAVRGG-SPEFSPGLTPRNYSVPRASYLGSAYPAVSGLQYP 179
           PPLQ+Q A+H+++  V+QGNA+RGG  P+  P + PRNY++P ASY+GSAYPAV G+QYP
Sbjct: 243 PPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALPPASYVGSAYPAVPGIQYP 302

Query: 178 LAYAGGIMSNRPLSGPPSPI-PLAANNHPAAXXXXXXXXXGQLEGPPGANLFIYHIPQEF 2
           +AY GG+MS RPLS  P  + P   +++ A          GQLEGPPG+NLFIYHIPQEF
Sbjct: 303 MAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPPGSNLFIYHIPQEF 362


>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/120 (56%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
 Frame = -3

Query: 355 PPLQNQHAYHNMLSSVSQGNAVRGGSPEFSPGLTPRNYSVPRASYLGSAYPAVSGLQYPL 176
           PP+Q+Q A+HNM+  V+QG+A+R  +P+ +  + PRNY+VP ASY+GSAYPA+ GLQYP+
Sbjct: 254 PPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYPM 313

Query: 175 AYAGGIMSNRPLSGPPS--PIPLAANNHPAAXXXXXXXXXGQLEGPPGANLFIYHIPQEF 2
           AY GGIMS++PLSG P   P  +  +N P           GQ+EGPPGANLFIYHIPQEF
Sbjct: 314 AYHGGIMSHQPLSGSPGSRPPAMMTSNSP-TNSGAGASSGGQVEGPPGANLFIYHIPQEF 372


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/120 (56%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
 Frame = -3

Query: 355 PPLQNQHAYHNMLSSVSQGNAVRGGSPEFSPGLTPRNYSVPRASYLGSAYPAVSGLQYPL 176
           PP+Q+Q A+HNM+  V+QG+A+R  +P+ +  + PRNY+VP ASY+GSAYPA+ GLQYP+
Sbjct: 244 PPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYPM 303

Query: 175 AYAGGIMSNRPLSGPPS--PIPLAANNHPAAXXXXXXXXXGQLEGPPGANLFIYHIPQEF 2
           AY GGIMS++PLSG P   P  +  +N P           GQ+EGPPGANLFIYHIPQEF
Sbjct: 304 AYHGGIMSHQPLSGSPGSRPPAMMTSNSP-TNSGAGASSGGQVEGPPGANLFIYHIPQEF 362


>emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
          Length = 450

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/120 (56%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
 Frame = -3

Query: 355 PPLQNQHAYHNMLSSVSQGNAVRGGSPEFSPGLTPRNYSVPRASYLGSAYPAVSGLQYPL 176
           PP+Q+Q A+HNM+  V+QG+A+R  +P+ +  + PRNY+VP ASY+GSAYPA+ GLQYP+
Sbjct: 298 PPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYPM 357

Query: 175 AYAGGIMSNRPLSGPPS--PIPLAANNHPAAXXXXXXXXXGQLEGPPGANLFIYHIPQEF 2
           AY GGIMS++PLSG P   P  +  +N P           GQ+EGPPGANLFIYHIPQEF
Sbjct: 358 AYHGGIMSHQPLSGSPGSRPPAMMTSNSP-TNSGAGASSGGQVEGPPGANLFIYHIPQEF 416


>ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
          Length = 431

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/119 (55%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
 Frame = -3

Query: 355 PPLQNQHAYHNMLSSVSQGNAVRGGSPEFSPGLTPRNYSVPRASYLGSAYPAVSGLQYPL 176
           PP+Q+QH YHNM+  ++QGNA+R   P+  P + PRNY VP ASY+GS YPAV GLQ+P+
Sbjct: 243 PPMQSQHGYHNMMPHMNQGNALR---PDLGPNMNPRNYHVPPASYVGS-YPAVPGLQHPM 298

Query: 175 AYAGGIMSNRPLSGPPSPI-PLAANNHPAAXXXXXXXXXGQLEGPPGANLFIYHIPQEF 2
           AY  G++S RP++  P  + P + NN+ AA         GQ EGPPGANLFIYHIPQEF
Sbjct: 299 AYPTGMISPRPMNTSPGSVSPASGNNNHAASSGASKNSGGQAEGPPGANLFIYHIPQEF 357


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