BLASTX nr result

ID: Angelica23_contig00033276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00033276
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81006.1| hypothetical protein VITISV_011581 [Vitis vinifera]   106   2e-21
ref|XP_002273351.1| PREDICTED: transcription initiation factor T...   105   4e-21
ref|XP_002273382.1| PREDICTED: transcription initiation factor T...   105   4e-21
ref|XP_003549807.1| PREDICTED: transcription initiation factor T...   103   1e-20
ref|XP_003549806.1| PREDICTED: transcription initiation factor T...   103   1e-20

>emb|CAN81006.1| hypothetical protein VITISV_011581 [Vitis vinifera]
          Length = 257

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/86 (56%), Positives = 65/86 (75%)
 Frame = -2

Query: 260 VYLSSIDRELVPNLLIMCASKDVQFVDEHQHGQENSDNGLQSSPGFKQNSKLIHIDYWVD 81
           +Y+S+++REL PNLLIMC   +    +  Q GQ++ +NGL SS   KQN KL+ +DYWV+
Sbjct: 108 MYVSALERELXPNLLIMCCKPEKSASE--QQGQQSLENGLHSSGEPKQNVKLVRVDYWVE 165

Query: 80  KAETGIHFSKDVLYTDNQTRRARCWF 3
           +AETGIHF  +VL+TDNQ RRARCWF
Sbjct: 166 RAETGIHFEDNVLHTDNQIRRARCWF 191


>ref|XP_002273351.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 1 [Vitis vinifera]
          Length = 1325

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/86 (56%), Positives = 65/86 (75%)
 Frame = -2

Query: 260 VYLSSIDRELVPNLLIMCASKDVQFVDEHQHGQENSDNGLQSSPGFKQNSKLIHIDYWVD 81
           +Y+S+++REL PNLLIMC   +    +  Q GQ++ +NGL SS   KQN KL+ +DYWV+
Sbjct: 108 MYVSALERELDPNLLIMCCKPEKSASE--QQGQQSLENGLHSSGEPKQNVKLVRVDYWVE 165

Query: 80  KAETGIHFSKDVLYTDNQTRRARCWF 3
           +AETGIHF  +VL+TDNQ RRARCWF
Sbjct: 166 RAETGIHFEDNVLHTDNQIRRARCWF 191


>ref|XP_002273382.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 2 [Vitis vinifera]
          Length = 1345

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/86 (56%), Positives = 65/86 (75%)
 Frame = -2

Query: 260 VYLSSIDRELVPNLLIMCASKDVQFVDEHQHGQENSDNGLQSSPGFKQNSKLIHIDYWVD 81
           +Y+S+++REL PNLLIMC   +    +  Q GQ++ +NGL SS   KQN KL+ +DYWV+
Sbjct: 108 MYVSALERELDPNLLIMCCKPEKSASE--QQGQQSLENGLHSSGEPKQNVKLVRVDYWVE 165

Query: 80  KAETGIHFSKDVLYTDNQTRRARCWF 3
           +AETGIHF  +VL+TDNQ RRARCWF
Sbjct: 166 RAETGIHFEDNVLHTDNQIRRARCWF 191


>ref|XP_003549807.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 2 [Glycine max]
          Length = 1368

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = -2

Query: 260 VYLSSIDRELVPNLLIMCASKDVQFVDEHQHGQENSDNGLQSSPGFKQNSKLIHIDYWVD 81
           VY+S++++ELVPNLLI C        ++ Q  Q  S+NG  SS   KQN + + IDYW++
Sbjct: 107 VYMSALEKELVPNLLINCCKPSKAESEQQQEQQPTSENGFHSSAEPKQNVRTVRIDYWIE 166

Query: 80  KAETGIHFSKDVLYTDNQTRRARCWF 3
           KAETGIHF  ++L+TDNQ RRARCWF
Sbjct: 167 KAETGIHFRNNLLHTDNQIRRARCWF 192


>ref|XP_003549806.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 1 [Glycine max]
          Length = 1388

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = -2

Query: 260 VYLSSIDRELVPNLLIMCASKDVQFVDEHQHGQENSDNGLQSSPGFKQNSKLIHIDYWVD 81
           VY+S++++ELVPNLLI C        ++ Q  Q  S+NG  SS   KQN + + IDYW++
Sbjct: 107 VYMSALEKELVPNLLINCCKPSKAESEQQQEQQPTSENGFHSSAEPKQNVRTVRIDYWIE 166

Query: 80  KAETGIHFSKDVLYTDNQTRRARCWF 3
           KAETGIHF  ++L+TDNQ RRARCWF
Sbjct: 167 KAETGIHFRNNLLHTDNQIRRARCWF 192


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