BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00033243
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...   121   6e-26
ref|XP_002527978.1| pentatricopeptide repeat-containing protein,...    94   1e-17
ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2...    85   6e-15
dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]                 84   2e-14
ref|NP_568460.1| pentatricopeptide repeat-containing protein [Ar...    82   5e-14

>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  121 bits (304), Expect = 6e-26
 Identities = 69/159 (43%), Positives = 97/159 (61%), Gaps = 13/159 (8%)
 Frame = +3

Query: 99  SVLFLRLFNSSIQIFDSIKFNICQKIK----------LDKRPNG---LIPSCLDDIIANV 239
           S +F RLFN+ I+   SIK ++ Q              + RP+G   L+P  L+D+I +V
Sbjct: 10  SHVFFRLFNACIE---SIKHDVAQIFANVFSFKPYSPANNRPSGHGNLLPFALEDLIISV 66

Query: 240 GTQCQNKSKKLFSDNKDSGNKEQPEAVFNVLDEMLKGSLDRLKAMRENISWAHLGVTGCY 419
           G Q Q  ++  FS NK    +  P  VFNVLD +LK SL+RLK MRE++S   +G+ GC 
Sbjct: 67  GNQYQVTTQDWFSQNKGHDEERDPRVVFNVLDAILKDSLERLKMMRESVSLTKIGLNGCT 126

Query: 420 LGADYSQHLAIIKALCLESKLGVALWLRNRMLQNFLVPD 536
           L  DY+  +A+I+ LCLE KL  ALWLRN+M+Q  ++PD
Sbjct: 127 LEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPD 165


>ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532604|gb|EEF34390.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 56/157 (35%), Positives = 92/157 (58%), Gaps = 6/157 (3%)
 Frame = +3

Query: 84  AAVDTSVLFLRLFNSSIQIFDSIKFNICQKI-KLDKRPNGLIPSC---LDDIIANVGTQC 251
           ++  + +  LRL + ++   D+IK +  Q    +  R + + P+     DD++  +  +C
Sbjct: 11  SSASSHIFLLRLLDRAM---DTIKHHTAQIFANIFCRESIIDPNASYFFDDMVKTLSNRC 67

Query: 252 QNKSKKLFSDNKDSGNKEQPEAVFNVLDEMLKGSLDRLKAMREN--ISWAHLGVTGCYLG 425
                +L  DNK+  +++ P+ VFNVLD MLKGSL+RLK+MRE+  IS   +G+ G  + 
Sbjct: 68  -----RLRRDNKNLNDEDDPQVVFNVLDAMLKGSLERLKSMRESIGISSVKVGLAGRSVD 122

Query: 426 ADYSQHLAIIKALCLESKLGVALWLRNRMLQNFLVPD 536
             Y+ H ++++ LCL  KLG ALWLR ++L    VPD
Sbjct: 123 VSYAGHASLVRDLCLAGKLGAALWLRRKLLHKGFVPD 159


>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
 Frame = +3

Query: 273 FSDNKDSGNKEQPEAVFNVLDEMLKGSLDRLKAMR-ENISWAH-LGVTGCYLGADYSQHL 446
           FS+NK          VFNVLD MLKGSLDRLK+MR + +S+ +  G+TGC L  + + + 
Sbjct: 9   FSNNKQGDGGGGDPLVFNVLDSMLKGSLDRLKSMRLQFVSFLYGKGITGCALDVNCAGNE 68

Query: 447 AIIKALCLESKLGVALWLRNRMLQNFLVPD 536
           AIIK LCL  KLG ALWLR++M+Q   VPD
Sbjct: 69  AIIKDLCLGGKLGPALWLRSKMIQKGFVPD 98


>dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
          Length = 593

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
 Frame = +3

Query: 78  CIAAVDTSVLFLRLFNSSIQIFDSIKFNICQKIKLDKRPNGLIPSCLDDIIANVGTQCQN 257
           C     +     RL N S+         +   I  + R   +  SC++   +  G     
Sbjct: 7   CGEVTSSQFTVFRLLNQSLDFVSDNVSRLLAPIFTNLRDLEMRLSCIERPPSISGNHSHL 66

Query: 258 KSKKLFSDNKDSGNKEQPEAVFNVLDEMLKGSLDRLKAMRENISWAHLGVTGCYLGADY- 434
            ++K FSD KD   KE PEA+FNVLD +LK SLDRL ++RE++  A           DY 
Sbjct: 67  CTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQAK--------SFDYD 118

Query: 435 ---SQHLAIIKALCLESKLGVALWLRNRMLQNFLVP 533
              S H +I++ LCL+ KL  ALWLR +M+ + ++P
Sbjct: 119 DCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIP 154


>ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g24830 gi|22655280|gb|AAM98230.1| putative protein
           [Arabidopsis thaliana] gi|30725398|gb|AAP37721.1|
           At5g24830 [Arabidopsis thaliana]
           gi|332005984|gb|AED93367.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 593

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
 Frame = +3

Query: 78  CIAAVDTSVLFLRLFNSSIQIFDSIKFNICQKIKLDKRPNGLIPSCLDDIIANVGTQCQN 257
           C     +     RL N S+         +   I  + R   +  SC++   +  G     
Sbjct: 7   CGEVTSSQFTVFRLLNQSLDFVSDNVSRLLAPIFTNLRDFEMRLSCIERPPSISGNHSHL 66

Query: 258 KSKKLFSDNKDSGNKEQPEAVFNVLDEMLKGSLDRLKAMRENISWAHLGVTGCYLGADY- 434
            ++K FSD KD   KE PEA+FNVLD +LK SLDRL ++RE++              DY 
Sbjct: 67  CTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTK--------SFDYD 118

Query: 435 ---SQHLAIIKALCLESKLGVALWLRNRMLQNFLVP 533
              S H +I++ LCL+ KL  ALWLR +M+ + ++P
Sbjct: 119 DCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIP 154