BLASTX nr result

ID: Angelica23_contig00033169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00033169
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533006.1| RNA binding protein, putative [Ricinus commu...    85   7e-15
ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c...    80   2e-13
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold ...    72   6e-11
ref|XP_003598902.1| hypothetical protein MTR_3g023170 [Medicago ...    69   4e-10

>ref|XP_002533006.1| RNA binding protein, putative [Ricinus communis]
           gi|223527217|gb|EEF29381.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 197

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
 Frame = -1

Query: 468 LFTCPFAQRCWELAKMNEFFKMDLPFLSMLCELFSNKSTSVLELFCSIAWKLWDHRNLVV 289
           L  C F +  W ++ +      +      L E+F+    S       + W LW HRN VV
Sbjct: 29  LIDCSFVKEVWVISVLISRGNRNGSICDWLQEMFTKFEKSTWGCIAVLVWNLWIHRNEVV 88

Query: 288 WNRRYHTPELVVNGASSFLFMWQQAQASKKFLVSSNS--REGVLVWKKPIVGWVICNIDA 115
           W  +   P  +V+GA ++L  W  AQ +      ++      +  WKKP  GW  CNIDA
Sbjct: 89  WYSKRKQPTQIVDGAVTYLHKWLIAQQTNPPSPDNSGLFHHNLAKWKKPKTGWPKCNIDA 148

Query: 114 AVFADQRLSTFGCLVRNADGNVV-AGCNGKFLGNVDPKL 1
           A+F  Q +    C++RN +G  + A  N     +++PKL
Sbjct: 149 AIFNQQGMIGADCVLRNTEGAFIGARINSFVQSDLNPKL 187


>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
           gi|223534693|gb|EEF36385.1| hypothetical protein
           RCOM_0596960 [Ricinus communis]
          Length = 270

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
 Frame = -1

Query: 468 LFTCPFAQRCWELAKMNEFFKMDLPFLSMLCELFSNKSTSVLELFCSIAWKLWDHRNLVV 289
           L  C F +  W ++ +      +      L E+F+    S      +I W LW HRN VV
Sbjct: 97  LIDCSFVKEVWVISVLVSRGNRNGSICDWLQEIFTKFDKSTWHCIAAIVWNLWIHRNEVV 156

Query: 288 WNRRYHTPELVVNGASSFLFMWQQAQASKKFLVSSNS--REGVLVWKKPIVGWVICNIDA 115
           WN +   P  +V+GA ++L  W  AQ +      +N      +  WKKP  G + CN+DA
Sbjct: 157 WNSKRKQPRQIVDGAVTYLQRWLIAQQTNPPSPDNNEVFNHNLAKWKKPKSGSLKCNVDA 216

Query: 114 AVFADQRLSTFGCLVRNADG 55
           + F  Q +   G ++RN +G
Sbjct: 217 STFNQQGMIGAGYVLRNTEG 236


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
 Frame = -1

Query: 468 LFTCPFAQRCWELAKMNEFFKMDLPFLSMLCELFSNKSTSVLELFCSIAWKLWDHRNLVV 289
           LF C  A+ CW+L      F  + P  S +   F +           +   LW+ RN  V
Sbjct: 483 LFGCSMARECWDLLGFRFSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSLWNQRNHWV 542

Query: 288 WNRRYHTPELVVNGASSFLFMWQQAQASKKFLVS--SNSREGVLVWKKPIVGWVICNIDA 115
           WN++ +T   V++ A+  L    +AQ++ + +     ++ +    W KP +GW+  N D 
Sbjct: 543 WNKQSNTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNTDVTRKWTKPELGWLKINTDT 602

Query: 114 AVFADQRLSTFGCLVRNADGNVVAGCNGKFLG 19
           A+F  Q     GC+VR+++G ++   + + +G
Sbjct: 603 ALFLKQGRIGLGCVVRDSNGRMIMARSERRVG 634


>gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 380

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/99 (37%), Positives = 51/99 (51%)
 Frame = -1

Query: 342 ELFCSIAWKLWDHRNLVVWNRRYHTPELVVNGASSFLFMWQQAQASKKFLVSSNSREGVL 163
           ++F    W LW HRN  VWN    T E + + A +FL  W+ AQ ++     +N    + 
Sbjct: 227 QIFAVTLWSLWRHRNNKVWNNIVETTEEIGDRAVAFLNSWKAAQETRIRSSPANPHFDIS 286

Query: 162 VWKKPIVGWVICNIDAAVFADQRLSTFGCLVRNADGNVV 46
            W KP VG   CN+DAA  A      FG  +R+A+GN V
Sbjct: 287 KWSKPSVGRFKCNVDAAFSASLHRVGFGACIRDANGNHV 325


>ref|XP_003598902.1| hypothetical protein MTR_3g023170 [Medicago truncatula]
           gi|355487950|gb|AES69153.1| hypothetical protein
           MTR_3g023170 [Medicago truncatula]
          Length = 274

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/99 (35%), Positives = 49/99 (49%)
 Frame = -1

Query: 342 ELFCSIAWKLWDHRNLVVWNRRYHTPELVVNGASSFLFMWQQAQASKKFLVSSNSREGVL 163
           +LF  I W LW HRN  VWN    T +     A +FL  W+ AQ  +    + N+   + 
Sbjct: 68  QLFAVILWSLWKHRNNKVWNNVTETAQQTGERAMNFLSSWKNAQDVRNQNTNRNTHGVID 127

Query: 162 VWKKPIVGWVICNIDAAVFADQRLSTFGCLVRNADGNVV 46
            W+KP  G   CN+DA+         FG  +R+A+GN V
Sbjct: 128 SWEKPSPGRFKCNVDASFSTTLNKVGFGACIRDAEGNFV 166


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