BLASTX nr result
ID: Angelica23_contig00033160
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00033160
(455 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_188538.1| SWIB complex BAF60b domain-containing protein [... 117 1e-24
dbj|BAB01706.1| unnamed protein product [Arabidopsis thaliana] 117 1e-24
ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus c... 108 6e-22
ref|XP_003517283.1| PREDICTED: upstream activation factor subuni... 107 1e-21
ref|XP_003517282.1| PREDICTED: upstream activation factor subuni... 107 1e-21
>ref|NP_188538.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana] gi|332642670|gb|AEE76191.1| SWIB complex
BAF60b domain-containing protein [Arabidopsis thaliana]
Length = 462
Score = 117 bits (292), Expect = 1e-24
Identities = 54/77 (70%), Positives = 66/77 (85%)
Frame = +3
Query: 3 PLSDALVKFLGTGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFD 182
PLSDALVKFLG GE SL+R DV+KR+W YI+HN+LQDP D R+I DEKLKELFEVD+F+
Sbjct: 386 PLSDALVKFLGDGENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKLKELFEVDSFE 445
Query: 183 TLAVSKLLKSHFVKAEK 233
+VSKLL +HF+KAE+
Sbjct: 446 DTSVSKLLTNHFIKAEQ 462
Score = 63.2 bits (152), Expect = 2e-08
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +3
Query: 36 TGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFDTLAVSKLLKSH 215
TG T LART+V+K +W YI NNLQDP D II DE + LF V++ + ++K L H
Sbjct: 278 TGVTELARTEVVKLLWKYIKENNLQDPNDKRSIICDESFRSLFPVESINMFQMNKQLTKH 337
>dbj|BAB01706.1| unnamed protein product [Arabidopsis thaliana]
Length = 452
Score = 117 bits (292), Expect = 1e-24
Identities = 54/77 (70%), Positives = 66/77 (85%)
Frame = +3
Query: 3 PLSDALVKFLGTGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFD 182
PLSDALVKFLG GE SL+R DV+KR+W YI+HN+LQDP D R+I DEKLKELFEVD+F+
Sbjct: 376 PLSDALVKFLGDGENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKLKELFEVDSFE 435
Query: 183 TLAVSKLLKSHFVKAEK 233
+VSKLL +HF+KAE+
Sbjct: 436 DTSVSKLLTNHFIKAEQ 452
Score = 63.2 bits (152), Expect = 2e-08
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +3
Query: 36 TGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFDTLAVSKLLKSH 215
TG T LART+V+K +W YI NNLQDP D II DE + LF V++ + ++K L H
Sbjct: 266 TGVTELARTEVVKLLWKYIKENNLQDPNDKRSIICDESFRSLFPVESINMFQMNKQLTKH 325
>ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus communis]
gi|223538877|gb|EEF40475.1| brg-1 associated factor,
putative [Ricinus communis]
Length = 614
Score = 108 bits (269), Expect = 6e-22
Identities = 50/77 (64%), Positives = 62/77 (80%)
Frame = +3
Query: 3 PLSDALVKFLGTGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFD 182
PLSD LVKF+GTGE L+R DV+KRIW YI N+LQDP D RI+ D+KLKELFEVD+F+
Sbjct: 538 PLSDPLVKFIGTGENELSRADVVKRIWGYIKQNDLQDPSDKRRILCDDKLKELFEVDSFN 597
Query: 183 TLAVSKLLKSHFVKAEK 233
+VSKLL +HF+K E+
Sbjct: 598 GFSVSKLLTAHFIKMEQ 614
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +3
Query: 6 LSDALVKFLGTGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFDT 185
LS L +F TGE+ LART+V+K++W YI NNLQDP + I+ DE L+ LF VD +
Sbjct: 422 LSPQLQEF--TGESELARTEVVKKLWIYIRENNLQDPKNKRNILCDESLRTLFRVDCINM 479
Query: 186 LAVSKLLKSH 215
++K+L H
Sbjct: 480 FQMNKVLSKH 489
Score = 62.4 bits (150), Expect = 4e-08
Identities = 31/70 (44%), Positives = 46/70 (65%)
Frame = +3
Query: 6 LSDALVKFLGTGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFDT 185
LS L +F+G E+ ART+V+K++W YI NNLQDP + I+ DE L+ LF VD+ +
Sbjct: 273 LSPQLQEFIG--ESKSARTEVVKKLWVYIRENNLQDPKNRRIILCDESLRALFRVDSINM 330
Query: 186 LAVSKLLKSH 215
++K+L H
Sbjct: 331 FQMNKVLSKH 340
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/70 (44%), Positives = 45/70 (64%)
Frame = +3
Query: 6 LSDALVKFLGTGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFDT 185
LS L KF+G E LART+V+K++W YI N+LQDP + I DE L++LF V++ +
Sbjct: 125 LSPQLHKFVGVSE--LARTEVVKKLWAYIRENDLQDPKNRRIIKCDEALRDLFRVNSINM 182
Query: 186 LAVSKLLKSH 215
++K L H
Sbjct: 183 FQMNKALSKH 192
>ref|XP_003517283.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
[Glycine max]
Length = 331
Score = 107 bits (267), Expect = 1e-21
Identities = 52/76 (68%), Positives = 61/76 (80%)
Frame = +3
Query: 6 LSDALVKFLGTGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFDT 185
LSDALV FLGTGE+ LARTDVIKR+W+YI NNLQDP D +II DEKLKELF+VD+F
Sbjct: 256 LSDALVNFLGTGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELFDVDSFTG 315
Query: 186 LAVSKLLKSHFVKAEK 233
V+KLL HF+K E+
Sbjct: 316 FTVTKLLAPHFIKTEQ 331
Score = 57.4 bits (137), Expect = 1e-06
Identities = 29/70 (41%), Positives = 44/70 (62%)
Frame = +3
Query: 6 LSDALVKFLGTGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFDT 185
LS L +F+ E +ART+V+K++W YI NLQDP + II DE+L+ LF V++ +
Sbjct: 136 LSPQLQEFMEAPE--MARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRSLFNVNSINM 193
Query: 186 LAVSKLLKSH 215
++K L H
Sbjct: 194 FQMNKALSKH 203
>ref|XP_003517282.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Glycine max]
Length = 337
Score = 107 bits (267), Expect = 1e-21
Identities = 52/76 (68%), Positives = 61/76 (80%)
Frame = +3
Query: 6 LSDALVKFLGTGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFDT 185
LSDALV FLGTGE+ LARTDVIKR+W+YI NNLQDP D +II DEKLKELF+VD+F
Sbjct: 262 LSDALVNFLGTGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELFDVDSFTG 321
Query: 186 LAVSKLLKSHFVKAEK 233
V+KLL HF+K E+
Sbjct: 322 FTVTKLLAPHFIKTEQ 337
Score = 57.4 bits (137), Expect = 1e-06
Identities = 29/70 (41%), Positives = 44/70 (62%)
Frame = +3
Query: 6 LSDALVKFLGTGETSLARTDVIKRIWNYIDHNNLQDPFDSGRIISDEKLKELFEVDAFDT 185
LS L +F+ E +ART+V+K++W YI NLQDP + II DE+L+ LF V++ +
Sbjct: 142 LSPQLQEFMEAPE--MARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRSLFNVNSINM 199
Query: 186 LAVSKLLKSH 215
++K L H
Sbjct: 200 FQMNKALSKH 209