BLASTX nr result

ID: Angelica23_contig00033133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00033133
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...   161   4e-38
ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   160   8e-38
ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37
ref|XP_002877566.1| pentatricopeptide repeat-containing protein ...   156   1e-36

>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score =  173 bits (438), Expect = 1e-41
 Identities = 81/111 (72%), Positives = 95/111 (85%)
 Frame = +2

Query: 2   SRCGDMEKAYEVFKGMNNKSVVSWSAMISGLARNGFGREAIEAFWEMQKMGITPDKQIFT 181
           SRCG ++KAYEVFKGM NK+VVSWSAMISGLA NG+GREAIEAF EM ++G+ PD Q FT
Sbjct: 253 SRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFT 312

Query: 182 GVLSACSRSGLLDEGRMFFSQMSNEFGIMPNLHHYGCMVDLKSRAGLLEEA 334
           GVLSACS SG++DEG  FF +MS EFG+ PN+HHYGCMVDL  RAGLL++A
Sbjct: 313 GVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKA 363


>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score =  161 bits (408), Expect = 4e-38
 Identities = 74/111 (66%), Positives = 92/111 (82%)
 Frame = +2

Query: 2   SRCGDMEKAYEVFKGMNNKSVVSWSAMISGLARNGFGREAIEAFWEMQKMGITPDKQIFT 181
           SRCG +EKAY +FK M+ ++VVSWSAMISG A +G+GREAIEAF +MQ++G++PD Q  T
Sbjct: 317 SRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLT 376

Query: 182 GVLSACSRSGLLDEGRMFFSQMSNEFGIMPNLHHYGCMVDLKSRAGLLEEA 334
           GVLSACS  GL+D+G MFF +MS  FGI PN+HHYGCMVDL  RAGLL++A
Sbjct: 377 GVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQA 427


>ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g47530-like [Glycine max]
          Length = 515

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/112 (69%), Positives = 92/112 (82%), Gaps = 1/112 (0%)
 Frame = +2

Query: 2   SRCGDMEKAYEVFKGMNNKSVVSWSAMISGLARNGFGREAIEAFWEMQKMGITPDKQIFT 181
           SRCG ++KA EVFKG  NK+VVSWSAMISGLA NG+GREAIE+F EM ++GI PD Q  T
Sbjct: 188 SRCGCLDKAXEVFKGTGNKNVVSWSAMISGLAMNGYGREAIESFEEMLRIGIRPDDQTLT 247

Query: 182 GVLSACSRSGLLDEGRM-FFSQMSNEFGIMPNLHHYGCMVDLKSRAGLLEEA 334
           GVLSACS SG++DEG M FF +MS EFG+ PN+HHYGCMVDL   AGLL++A
Sbjct: 248 GVLSACSYSGMVDEGMMSFFDRMSREFGVTPNVHHYGCMVDLLGHAGLLDKA 299


>ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Cucumis sativus]
          Length = 602

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/111 (67%), Positives = 86/111 (77%)
 Frame = +2

Query: 2   SRCGDMEKAYEVFKGMNNKSVVSWSAMISGLARNGFGREAIEAFWEMQKMGITPDKQIFT 181
           SRCG M+KAYEVF  M  K+VVSWSAMISGL+ NG GREAIEAFWEMQK G+ P    FT
Sbjct: 276 SRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFT 335

Query: 182 GVLSACSRSGLLDEGRMFFSQMSNEFGIMPNLHHYGCMVDLKSRAGLLEEA 334
            VLSACS  GL+DEG  FF +M  EF I PN+HHYGC+VDL  RAG+L++A
Sbjct: 336 AVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQA 386


>ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323404|gb|EFH53825.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 591

 Score =  156 bits (395), Expect = 1e-36
 Identities = 77/112 (68%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
 Frame = +2

Query: 2   SRCGDMEKAYEVFKGMNNKSVVSWSAMISGLARNGFGREAIEAFWEMQKMGITPDKQIFT 181
           SRCG M+KAYEVF  M  ++VVSW+AMISGLA NGFG+EAIEAF EM K GI+P++Q  T
Sbjct: 263 SRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322

Query: 182 GVLSACSRSGLLDEGRMFFSQM-SNEFGIMPNLHHYGCMVDLKSRAGLLEEA 334
           G+LSACS SGL+DEG MFF +M S EF I PNLHHYGC+VDL  RA LL++A
Sbjct: 323 GLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKA 374


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