BLASTX nr result
ID: Angelica23_contig00032867
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00032867
(252 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACU33853.1| PPR1 protein [Capsicum annuum] 96 2e-18
ref|XP_002514843.1| pentatricopeptide repeat-containing protein,... 96 2e-18
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ... 96 4e-18
ref|XP_003619804.1| Pentatricopeptide repeat-containing protein ... 92 4e-17
emb|CBI35192.3| unnamed protein product [Vitis vinifera] 92 4e-17
>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 96.3 bits (238), Expect = 2e-18
Identities = 41/81 (50%), Positives = 60/81 (74%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
GLC +WE + LL EM NI+P+V+T++IL+D CK+G+ +D +V+ MI+KGV P
Sbjct: 247 GLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEP 306
Query: 184 TVVTYNTLMGGYCLRGQMDRA 246
++TY+ +M GYCLRGQ+DRA
Sbjct: 307 DIITYSAIMDGYCLRGQVDRA 327
Score = 68.6 bits (166), Expect = 5e-10
Identities = 25/83 (30%), Positives = 50/83 (60%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
GLC + ED + ++R M + + PD+ TY+ ++D YC +G+ V +++ KG+ P
Sbjct: 282 GLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKP 341
Query: 184 TVVTYNTLMGGYCLRGQMDRALE 252
+ +Y+ L+ GYC + + +A++
Sbjct: 342 NIFSYSILINGYCKKKNLAKAMQ 364
Score = 59.3 bits (142), Expect = 3e-07
Identities = 31/80 (38%), Positives = 44/80 (55%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
GL E T LLR M N PDV TY+I++DA CK ++++ M QK + P
Sbjct: 177 GLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPP 236
Query: 184 TVVTYNTLMGGYCLRGQMDR 243
+ TYN+L+ G C GQ ++
Sbjct: 237 NIFTYNSLIDGLCKLGQWEK 256
>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 594
Score = 96.3 bits (238), Expect = 2e-18
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
G+C + W+++ LL EM +RNI PDV T++I VD +CKKG + +I++MI++G+ P
Sbjct: 358 GVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRP 417
Query: 184 TVVTYNTLMGGYCLRGQMDRA 246
VVTYN+LM GYCL QMD A
Sbjct: 418 NVVTYNSLMDGYCLHSQMDEA 438
Score = 66.6 bits (161), Expect = 2e-09
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
G+CN +W+ L +EM N+ PDV T++ILVDA CK+G + V MIQ + P
Sbjct: 288 GMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEP 347
Query: 184 TVVTYNTLMGGYC 222
+VTY++L+ G C
Sbjct: 348 DIVTYSSLIHGVC 360
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +1
Query: 1 QGLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVF 180
+G C R ++ ++L EM+ + ++P+ T+ L+ C+ GR ++ M G
Sbjct: 462 KGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCP 521
Query: 181 PTVVTYNTLMGGYCLRGQMDRAL 249
P ++TY+TL+ G+C G +D AL
Sbjct: 522 PDLITYSTLLSGFCKHGHLDEAL 544
Score = 58.2 bits (139), Expect = 7e-07
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
G C ++ ++ ++ M + +PDV +YNIL+ YCK R + + D M KG+ P
Sbjct: 428 GYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTP 487
Query: 184 TVVTYNTLMGGYCLRGQMDRALE 252
+T+ TL+ G C G+ A E
Sbjct: 488 NSITHTTLISGLCQAGRPYAAKE 510
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
GLC + +++M + P+V +Y+I++D+ CK + D+ M G+ P
Sbjct: 218 GLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISP 277
Query: 184 TVVTYNTLMGGYCLRGQMDRA 246
TVVTYN+L+ G C GQ +A
Sbjct: 278 TVVTYNSLIYGMCNSGQWKQA 298
>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 95.5 bits (236), Expect = 4e-18
Identities = 43/81 (53%), Positives = 60/81 (74%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
G C +++D RL EM +NI+PD YT+NILVDA CK+G+ K+ +VI +M+++GV P
Sbjct: 237 GFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEP 296
Query: 184 TVVTYNTLMGGYCLRGQMDRA 246
TVVTYNTLM GYCL ++ +A
Sbjct: 297 TVVTYNTLMDGYCLVNEVGKA 317
Score = 55.8 bits (133), Expect = 4e-06
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
G C ++ L EM R I+P TYN L+D CK GR +++D M +
Sbjct: 342 GFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPA 401
Query: 184 TVVTYNTLMGGYCLRGQMDRAL 249
+VTYN+L+ +C +D+A+
Sbjct: 402 DIVTYNSLIDVFCKNQHVDKAI 423
Score = 55.8 bits (133), Expect = 4e-06
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +1
Query: 43 LLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFPTVVTYNTLMGGYC 222
L++++ I P++ TYNIL+D CK G+ K+ DV ++ KG TYN ++ G C
Sbjct: 425 LVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLC 484
Query: 223 LRGQMDRA 246
G D A
Sbjct: 485 KEGLFDEA 492
>ref|XP_003619804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494819|gb|AES76022.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 344
Score = 92.0 bits (227), Expect = 4e-17
Identities = 42/81 (51%), Positives = 57/81 (70%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
G C + DT L +M A NI+PDVYT+NI VDA+CK+GR K+ V+ +M++ G+ P
Sbjct: 94 GFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKP 153
Query: 184 TVVTYNTLMGGYCLRGQMDRA 246
+VVTYNTLM GYCL +M+ A
Sbjct: 154 SVVTYNTLMNGYCLVKEMNMA 174
Score = 57.0 bits (136), Expect = 2e-06
Identities = 23/79 (29%), Positives = 44/79 (55%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
G C + +LLR ++ + + P+V Y+ ++D CK D D+ M+ K + P
Sbjct: 24 GSCKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISP 83
Query: 184 TVVTYNTLMGGYCLRGQMD 240
V+TY+ L+ G+C+ G+++
Sbjct: 84 DVITYSALISGFCIVGKLN 102
>emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 92.0 bits (227), Expect = 4e-17
Identities = 41/83 (49%), Positives = 55/83 (66%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
GLC W+ L+ EM I PDV+T N +VDA CK+G + HDV+D+MI +GV P
Sbjct: 194 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 253
Query: 184 TVVTYNTLMGGYCLRGQMDRALE 252
VVTYN LM G+CLR ++D A++
Sbjct: 254 NVVTYNALMDGHCLRNEVDVAVK 276
Score = 85.1 bits (209), Expect = 5e-15
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +1
Query: 7 LCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFPT 186
LCN W+ LL EM I P+V ++ +VDA CK+G HDV+D+MI++GV P
Sbjct: 683 LCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPD 742
Query: 187 VVTYNTLMGGYCLRGQMDRALE 252
VVTY LM G+CLR +MD A++
Sbjct: 743 VVTYTALMDGHCLRSEMDEAVK 764
Score = 58.9 bits (141), Expect = 4e-07
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +1
Query: 55 MNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFPTVVTYNTLMGGYCLRGQ 234
M R + PDV TY L+D +C + + V D M+ KG P V +YN L+ GYC +
Sbjct: 734 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 793
Query: 235 MDRAL 249
MD+A+
Sbjct: 794 MDKAM 798
Score = 57.8 bits (138), Expect = 9e-07
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = +1
Query: 7 LCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFPT 186
LC + + LL+ + N+ D+ YNI +D C+ G + D+ + KG+ P
Sbjct: 858 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 917
Query: 187 VVTYNTLMGGYCLRGQMDRA 246
V TYN ++ G C RG +D A
Sbjct: 918 VRTYNIMIHGLCKRGLLDEA 937
Score = 55.1 bits (131), Expect = 6e-06
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +1
Query: 4 GLCNFNRWEDTERLLREMNARNISPDVYTYNILVDAYCKKGRTKDTHDVIDIMIQKGVFP 183
G C + L EM+ + ++P+ TYN L+ C GR +D + M+ +G P
Sbjct: 299 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 358
Query: 184 TVVTYNTLMGGYCLRGQMDRAL 249
+VTY TL C +D+A+
Sbjct: 359 DLVTYRTLSDYLCKNRHLDKAM 380