BLASTX nr result

ID: Angelica23_contig00032809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032809
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568485.1| uncharacterized protein [Arabidopsis thaliana] ...    82   5e-14
gb|AAM64547.1| unknown [Arabidopsis thaliana]                          82   5e-14
ref|XP_002872219.1| hypothetical protein ARALYDRAFT_489488 [Arab...    78   8e-13
ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arab...    73   3e-11
ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-09

>ref|NP_568485.1| uncharacterized protein [Arabidopsis thaliana]
           gi|14488090|gb|AAK63865.1|AF389293_1 AT5g26741
           [Arabidopsis thaliana] gi|22655444|gb|AAM98314.1|
           At5g26741/At5g26741 [Arabidopsis thaliana]
           gi|332006187|gb|AED93570.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 99

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 7/92 (7%)
 Frame = +3

Query: 96  MSYIPIFRTEMGG------YTE-MEKRAVFLRSYHFSRKQSFSEKTKKSFFRIKKVIRVR 254
           MS   +FR+  GG      Y E MEKR +FLRSY FSRKQSF+EK  +S  R+K+V+  R
Sbjct: 1   MSEKLVFRSTSGGDYYGAPYGEYMEKRQLFLRSYQFSRKQSFAEKVSRSVTRVKRVVLTR 60

Query: 255 LRSAKRLRKMVWFRLTNGLFYSSRTKTRFFRL 350
           LRSA +L+++VW RL +  +Y  R   RFFRL
Sbjct: 61  LRSAPKLKRVVWSRLRSAFYYRRR---RFFRL 89


>gb|AAM64547.1| unknown [Arabidopsis thaliana]
          Length = 99

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 7/92 (7%)
 Frame = +3

Query: 96  MSYIPIFRTEMGG------YTE-MEKRAVFLRSYHFSRKQSFSEKTKKSFFRIKKVIRVR 254
           MS   +FR+  GG      Y E MEKR +FLRSY FSRKQSF+EK  +S  R+K+V+  R
Sbjct: 1   MSEKLVFRSTSGGDYYGAPYGEYMEKRQLFLRSYQFSRKQSFAEKVSRSVTRVKRVVLTR 60

Query: 255 LRSAKRLRKMVWFRLTNGLFYSSRTKTRFFRL 350
           LRSA +L+++VW RL +  +Y  R   RFFRL
Sbjct: 61  LRSAPKLKRVVWSRLRSAFYYRRR---RFFRL 89


>ref|XP_002872219.1| hypothetical protein ARALYDRAFT_489488 [Arabidopsis lyrata subsp.
           lyrata] gi|297318056|gb|EFH48478.1| hypothetical protein
           ARALYDRAFT_489488 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score = 78.2 bits (191), Expect = 8e-13
 Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 10/95 (10%)
 Frame = +3

Query: 96  MSYIPIFRTEMGG---------YTE-MEKRAVFLRSYHFSRKQSFSEKTKKSFFRIKKVI 245
           MS   +FR+  GG         Y E MEKR +FLRSY FSRKQSF+EK  +S  R+K+V+
Sbjct: 1   MSEKLVFRSSSGGDYYGTHGAPYGEYMEKRQLFLRSYQFSRKQSFTEKVSRSVKRVKRVV 60

Query: 246 RVRLRSAKRLRKMVWFRLTNGLFYSSRTKTRFFRL 350
             R RSA++L+++VW RL    FY  R   RF RL
Sbjct: 61  LTRFRSARKLKRVVWSRLRTAFFYRRR---RFCRL 92


>ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arabidopsis lyrata subsp.
           lyrata] gi|297330384|gb|EFH60803.1| hypothetical protein
           ARALYDRAFT_896695 [Arabidopsis lyrata subsp. lyrata]
          Length = 101

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/75 (54%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = +3

Query: 129 GGYTEMEKRAVFLRSYHFSRKQSFSEKTKKSFFRI-KKVIRVRLRSAKRLRKMVWFRLTN 305
           GGY  +EKR +FL+SY FSRKQS +EK K S  R+ KKV+ +RL+SA+RL+++VW R   
Sbjct: 20  GGY--VEKRQLFLKSYQFSRKQSLTEKIKISVKRVAKKVVWMRLKSARRLKRVVWSRFKT 77

Query: 306 GLFYSSRTKTRFFRL 350
             FY  R   RFFRL
Sbjct: 78  AFFYRRR---RFFRL 89


>ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|222871406|gb|EEF08537.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/69 (49%), Positives = 48/69 (69%)
 Frame = +3

Query: 144 MEKRAVFLRSYHFSRKQSFSEKTKKSFFRIKKVIRVRLRSAKRLRKMVWFRLTNGLFYSS 323
           MEKR +FLRSY F RK++ +E+ K S  R KKV+ +RLRSA+++R++VW RL    +   
Sbjct: 54  MEKRQLFLRSYQFCRKRTLTERIKGSLIRAKKVMWLRLRSARKIRRLVWSRLRYAFY--C 111

Query: 324 RTKTRFFRL 350
           R + RF RL
Sbjct: 112 RRRRRFLRL 120


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