BLASTX nr result

ID: Angelica23_contig00032805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032805
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus c...    67   1e-09
ref|XP_002871279.1| F box protein family [Arabidopsis lyrata sub...    65   8e-09
gb|AAR15502.1| F-box protein [Arabidopsis arenosa]                     64   2e-08
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    63   2e-08

>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
 Frame = +2

Query: 2   SGWFLKFKVDLDQLSKAFPEMTHNRHTV--VNEYAFSVLSLLRKREDFDEDSVLVLEVPG 175
           S W ++++V LD +  AFPEM  +       N YAF VLSL+   ED  E+S L+L +PG
Sbjct: 288 SFWRIRYRVQLDHVVAAFPEMVRSYLDAGDSNYYAFVVLSLVE--EDATEESSLLLHIPG 345

Query: 176 KVILYNLVHQSWKVVCSFCQ-ADSARDK---MCGILKAIDYNESLACV 307
           KVI YNL ++++K VC        +R K     G L A  Y E+LACV
Sbjct: 346 KVISYNLKNKTFKKVCELSYGTGGSRTKESLQFGWLDAYQYIETLACV 393


>ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus communis]
           gi|223550115|gb|EEF51602.1| hypothetical protein
           RCOM_1501190 [Ricinus communis]
          Length = 332

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   SGWFLKFKVDLDQLSKAFPEM--THNRHTVVNEYAFSVLSLLRKREDFDEDSVLVLEVPG 175
           SGWF+K++++L+++  AFPEM  T    TV+N YA+ +  ++R   D  E+S +VL +P 
Sbjct: 226 SGWFVKYRIELEEVIIAFPEMIKTQFEPTVLNYYAYEIWCIVRGESD--ENSYMVLHMPA 283

Query: 176 KVILYNLVHQSWKVVCSF 229
           K+I YNL  +S+K +C F
Sbjct: 284 KIIRYNLKGKSFKKLCDF 301


>ref|XP_002871279.1| F box protein family [Arabidopsis lyrata subsp. lyrata]
           gi|34013883|gb|AAQ56109.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317116|gb|EFH47538.1| F box protein family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2   SGWFLKFKVDLDQLSKAFPEMTHNRHTVVNEYAFSVLSLLRKREDFDEDSVLVLEVPGKV 181
           S W +K+ VDL+ L+ AFPEM    +T    YAFSV+  +  +E+ D +S ++L +P K 
Sbjct: 320 SSWSMKYNVDLEPLAAAFPEMITEDYTNRRIYAFSVIGFV--KEETDAESYILLHIPNKA 377

Query: 182 ILYNLVHQSWKVVCSF--CQADSARDKMCGILKAIDYNESLACV 307
           + YN + +++K +C F     D+  D      +   + +SLA V
Sbjct: 378 VKYNFIDKTFKKLCDFKPLVNDAPEDAFYRFQRTFPFIKSLANV 421


>gb|AAR15502.1| F-box protein [Arabidopsis arenosa]
          Length = 421

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/76 (38%), Positives = 48/76 (63%)
 Frame = +2

Query: 2   SGWFLKFKVDLDQLSKAFPEMTHNRHTVVNEYAFSVLSLLRKREDFDEDSVLVLEVPGKV 181
           S W +K+ VDL+ L+ AFPEM    +T    YAFSV+  +  +E+ D +S ++L +P K 
Sbjct: 320 SSWSVKYNVDLEPLAAAFPEMITEDYTNRRIYAFSVIGFV--KEETDAESYILLHIPNKA 377

Query: 182 ILYNLVHQSWKVVCSF 229
           + YN + +++K +C F
Sbjct: 378 VKYNFIDKTFKKLCDF 393


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   SGWFLKFKVDLDQLSKAFPEMTHNRHTVVNE-YAFSVLSLLRKREDFDEDSVLVLEVPGK 178
           SGWF+KF+VDL+ ++ AFP +    H   +  Y+FSVL ++R+ ++  EDS L L +PGK
Sbjct: 280 SGWFVKFRVDLNGVALAFPGIIEGYHEEYDYMYSFSVLCIVRREKE--EDSFLALHIPGK 337

Query: 179 VILYNLVHQSWKVVCSFCQADSARDKMCGILKAIDYNESLACV 307
           VI YN   +S++       +D+      G   A  Y ESL+ V
Sbjct: 338 VIGYNFSSKSYQT------SDTDCPLAFGWSYAFQYIESLSLV 374


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