BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032684
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      43   1e-06
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...    40   1e-06
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    42   6e-06

>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 42.7 bits (99), Expect(2) = 1e-06
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = -1

Query: 170 LDEKTAVKLKCEVVETAPMQVLVANGNHLTSKHECADFKWKVGEHEFQTSIRTLPL 3
           +D K A ++ C++  T PM V  A G    +     DF W++  + F T +RTLPL
Sbjct: 497 IDIKVAKEINCKLEGTRPMTVDAALGGKTVTLFRSKDFTWRMQGYSFTTEVRTLPL 552



 Score = 34.7 bits (78), Expect(2) = 1e-06
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = -3

Query: 354 VDKQEEVSTEIKEELHKLQPAME---VSVHAIEVVYNNQTLTLTGRRGHKEFSILVDGGS 184
           +D ++EV+  ++EE   + P  E   +S +A+        + L G+ G  +  I VD GS
Sbjct: 433 LDDEQEVNATVEEEDAVVNPNEEQPTISANALNGSTTFNCMRLMGQYGKHKLHIFVDPGS 492

Query: 183 THSF 172
           TH+F
Sbjct: 493 THNF 496


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 40.4 bits (93), Expect(2) = 1e-06
 Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = -3

Query: 354 VDKQEEVSTEI-KEELHKLQPAMEVSVHAIEVVYNNQTLTLTGRRGHKEFSILVDGGSTH 178
           VD++ E + E+  ++ H+ +P  ++SV+A+  +   +T+ + G    ++  IL+D GSTH
Sbjct: 331 VDEEFEDAVEVLSDDDHEQKPMPQISVNAVSGISGYKTMGVKGTVDKRDLFILIDSGSTH 390

Query: 177 SF 172
           +F
Sbjct: 391 NF 392



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -1

Query: 170 LDEKTAVKLKCEVVETAPMQVLVANGNHLTSKHECADFKWKVGEHEFQTSIRTLPL 3
           +D   A KL C V      +V VA+G  L    +   F WK+    FQ+ I  +PL
Sbjct: 393 IDSTVAAKLGCHVESAGLTKVAVADGRKLNVDGQIKGFTWKLQSTTFQSDILLIPL 448


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
           thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 42.0 bits (97), Expect(2) = 6e-06
 Identities = 22/56 (39%), Positives = 30/56 (53%)
 Frame = -1

Query: 170 LDEKTAVKLKCEVVETAPMQVLVANGNHLTSKHECADFKWKVGEHEFQTSIRTLPL 3
           LD  TA KL C+V      +V VA+G  L  + +  DF WK+    FQ+ I  +PL
Sbjct: 414 LDPNTAAKLGCKVDTAGLTRVSVADGRKLRVEGKVTDFSWKLQTTTFQSDILLIPL 469



 Score = 32.7 bits (73), Expect(2) = 6e-06
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = -3

Query: 351 DKQEEVSTEIKEELHKLQPAMEVSVHAIEVVYNNQTLTLTGRRGHKEFSILVDGGSTHSF 172
           D +EE+  +  E +       ++SV+A+  +   +T+ + G    K   IL+D GSTH+F
Sbjct: 360 DAREELVNDDDEHMP------QISVNAVSGIAGYKTMRVKGTYDKKIIFILIDSGSTHNF 413