BLASTX nr result

ID: Angelica23_contig00032610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032610
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...    67   1e-09
ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...    66   3e-09
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...    66   3e-09
ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana] gi...    65   4e-09
ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana] gi...    65   4e-09

>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 694

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/76 (43%), Positives = 50/76 (65%)
 Frame = -3

Query: 230 TAFQESGEEIIGCSAKELYVIKHELQNDEWFAQIMXXXXXXXXXXXXRIKEEFFGGKRML 51
           TAFQE+GEEI+G SAKELY++K+E Q+D  F +I+            +IKEE +G ++ +
Sbjct: 536 TAFQETGEEILGVSAKELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRV 595

Query: 50  NGVLVKARRISYGEET 3
              +VKA R++Y  E+
Sbjct: 596 KNTVVKADRVNYSSES 611


>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/76 (42%), Positives = 51/76 (67%)
 Frame = -3

Query: 230 TAFQESGEEIIGCSAKELYVIKHELQNDEWFAQIMXXXXXXXXXXXXRIKEEFFGGKRML 51
           TAFQE+GEEI+GCSAKELY++K+E ++D  F +I+            +IKEE +G ++ +
Sbjct: 536 TAFQEAGEEILGCSAKELYLLKYEEEDDFRFGEIIRSRLLNQFLFRLKIKEEMYGEEQRV 595

Query: 50  NGVLVKARRISYGEET 3
              +VKA +++Y  E+
Sbjct: 596 KITVVKADKVNYTSES 611


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 623

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/76 (42%), Positives = 49/76 (64%)
 Frame = -3

Query: 230 TAFQESGEEIIGCSAKELYVIKHELQNDEWFAQIMXXXXXXXXXXXXRIKEEFFGGKRML 51
           TAFQE+GEEI+G S KELY++K+E Q+D  F +I+            +IKEE +G ++ +
Sbjct: 536 TAFQETGEEILGVSGKELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRV 595

Query: 50  NGVLVKARRISYGEET 3
              +VKA R++Y  E+
Sbjct: 596 KNTVVKADRVNYSSES 611


>ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana]
           gi|330250915|gb|AEC06009.1| replication factor A1
           [Arabidopsis thaliana]
          Length = 617

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/76 (40%), Positives = 50/76 (65%)
 Frame = -3

Query: 230 TAFQESGEEIIGCSAKELYVIKHELQNDEWFAQIMXXXXXXXXXXXXRIKEEFFGGKRML 51
           TAFQE+GEEI+GC AK+LY +K+EL+ +E FA+I+            +IKEE +G ++ +
Sbjct: 533 TAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRV 592

Query: 50  NGVLVKARRISYGEET 3
              +VK  +++Y  E+
Sbjct: 593 KMTVVKVDKVNYTSES 608


>ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana]
           gi|4584356|gb|AAD25150.1| putative replication protein
           A1 [Arabidopsis thaliana] gi|26452416|dbj|BAC43293.1|
           putative replication protein A1 [Arabidopsis thaliana]
           gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis
           thaliana] gi|330250916|gb|AEC06010.1| replication factor
           A1 [Arabidopsis thaliana]
          Length = 640

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/76 (40%), Positives = 50/76 (65%)
 Frame = -3

Query: 230 TAFQESGEEIIGCSAKELYVIKHELQNDEWFAQIMXXXXXXXXXXXXRIKEEFFGGKRML 51
           TAFQE+GEEI+GC AK+LY +K+EL+ +E FA+I+            +IKEE +G ++ +
Sbjct: 556 TAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRV 615

Query: 50  NGVLVKARRISYGEET 3
              +VK  +++Y  E+
Sbjct: 616 KMTVVKVDKVNYTSES 631


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