BLASTX nr result

ID: Angelica23_contig00032594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032594
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    72   2e-24
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    69   9e-24
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]    75   3e-23
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...    65   2e-21
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    64   8e-21

>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 72.0 bits (175), Expect(2) = 2e-24
 Identities = 38/81 (46%), Positives = 50/81 (61%)
 Frame = -1

Query: 391  LLLSEGLCKDIDRSMCNFWGKSSSGQGNRIHRKAWDKLCQHINRGSLGFRNLRDFNLALL 212
            LLL + LC+DI+ SM N +   S+ Q   I   +W K+C+    G LGFR L DFNLALL
Sbjct: 1363 LLLPKDLCRDIE-SMMNXFFWDSNPQXRSIRWMSWXKMCKQKKDGGLGFRKLEDFNLALL 1421

Query: 211  GQQGLHLFSNISSLVSKVFQA 149
             +QG     N+ SLV+ +FQA
Sbjct: 1422 AKQGXRFLQNLDSLVTIIFQA 1442



 Score = 65.5 bits (158), Expect(2) = 2e-24
 Identities = 25/50 (50%), Positives = 38/50 (76%)
 Frame = -3

Query: 158  FSSKYYPNDSYLNAKLGSNPSFIWRSVWEAQSLVKQGARWRVGSGKRIQI 9
            F ++Y+ N S+LNA+LGSNPS++WRS+  AQ L+K G  W + SG ++Q+
Sbjct: 1440 FQARYFRNSSFLNAELGSNPSYMWRSILAAQDLLKMGCYWSIASGTKVQV 1489


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 69.3 bits (168), Expect(2) = 9e-24
 Identities = 38/81 (46%), Positives = 50/81 (61%)
 Frame = -1

Query: 391 LLLSEGLCKDIDRSMCNFWGKSSSGQGNRIHRKAWDKLCQHINRGSLGFRNLRDFNLALL 212
           LLL + LC+DI+ SM N +   S+ Q   I   +W K+C+    G LGFR L DFNLALL
Sbjct: 276 LLLPKDLCRDIE-SMMNGFFWDSNPQCRSIRWMSWGKMCKQKKDGGLGFRKLXDFNLALL 334

Query: 211 GQQGLHLFSNISSLVSKVFQA 149
            +QG     N  SLV+++FQA
Sbjct: 335 AKQGWRFLRNPDSLVTRIFQA 355



 Score = 65.9 bits (159), Expect(2) = 9e-24
 Identities = 25/50 (50%), Positives = 39/50 (78%)
 Frame = -3

Query: 158 FSSKYYPNDSYLNAKLGSNPSFIWRSVWEAQSLVKQGARWRVGSGKRIQI 9
           F ++Y+ N S+LNA+LGSNPS++WRS+  AQ L+K+G  W + SG ++Q+
Sbjct: 353 FQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTKVQV 402


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score = 75.5 bits (184), Expect(2) = 3e-23
 Identities = 36/82 (43%), Positives = 52/82 (63%)
 Frame = -1

Query: 394 TLLLSEGLCKDIDRSMCNFWGKSSSGQGNRIHRKAWDKLCQHINRGSLGFRNLRDFNLAL 215
           T LL   L +++ + M +FW    S  G RI+  +WDKLC     G LGFRN RDFNLA+
Sbjct: 327 TFLLPISLSEELQKMMNSFWWGXKSDGGRRINWLSWDKLCLRKEEGGLGFRNXRDFNLAM 386

Query: 214 LGQQGLHLFSNISSLVSKVFQA 149
           LG+QG +L +   SL++++ +A
Sbjct: 387 LGKQGWNLITKPDSLIARLLKA 408



 Score = 57.8 bits (138), Expect(2) = 3e-23
 Identities = 19/48 (39%), Positives = 36/48 (75%)
 Frame = -3

Query: 152 SKYYPNDSYLNAKLGSNPSFIWRSVWEAQSLVKQGARWRVGSGKRIQI 9
           ++YY +  +L+A+LG NPSF W+ +W +++++ +G+RWR+G G  I +
Sbjct: 408 ARYYRSGDFLSARLGHNPSFTWKGIWSSRAILLKGSRWRIGDGCSIDV 455


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score = 65.1 bits (157), Expect(2) = 2e-21
 Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = -1

Query: 388 LLSEGLCKDIDRSMCNF-WGKSSSGQGNRIHRKAWDKLCQHINRGSLGFRNLRDFNLALL 212
           L+   LC++++R M +F WG   +G+   I+   WD L  H + G LGFRNL  FNL++L
Sbjct: 340 LIPASLCEELERMMNSFYWGSKKNGRRG-INWMRWDFLTLHKSLGGLGFRNLEAFNLSML 398

Query: 211 GQQGLHLFSNISSLVSKVFQA 149
           G+QG  L S+ SSL +++ +A
Sbjct: 399 GKQGWKLLSDSSSLFTRILKA 419



 Score = 62.0 bits (149), Expect(2) = 2e-21
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -3

Query: 152 SKYYPNDSYLNAKLGSNPSFIWRSVWEAQSLVKQGARWRVGSGKRIQI 9
           +KY+P   +L+A LG NPS+ WRS+W  QSL+  G RW++G G +I +
Sbjct: 419 AKYFPRRDFLDATLGHNPSYTWRSLWSTQSLLTLGHRWKIGDGSKINV 466


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 63.5 bits (153), Expect(2) = 8e-21
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = -1

Query: 385 LSEGLCKDIDRSMCNFWGKSSSGQGNRIHRKAWDKLCQHINRGSLGFRNLRDFNLALLGQ 206
           L +G+C +I+  +CNFW      +  +IH  +W +LC+   +G +GFR L+ FN ALL +
Sbjct: 59  LPDGVCHEIESMVCNFWWXQKE-ETRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAK 117

Query: 205 QGLHLFSNISSLVSKVFQA 149
           Q   L     SLV++VF+A
Sbjct: 118 QCWRLVQRPQSLVARVFKA 136



 Score = 61.6 bits (148), Expect(2) = 8e-21
 Identities = 25/50 (50%), Positives = 37/50 (74%)
 Frame = -3

Query: 158 FSSKYYPNDSYLNAKLGSNPSFIWRSVWEAQSLVKQGARWRVGSGKRIQI 9
           F ++Y+P  S+L+A +GSNPSF WRS+  ++SL+  G RWRVG+G  I +
Sbjct: 134 FKARYFPQTSFLDALVGSNPSFTWRSIVGSRSLLNAGLRWRVGNGASISV 183


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