BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032477
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   196   2e-48
emb|CBI18968.3| unnamed protein product [Vitis vinifera]              189   3e-46
emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]                   165   3e-39
ref|NP_177856.2| topoisomerase (DNA) II binding protein 1 [Arabi...   165   3e-39
dbj|BAG91866.1| unnamed protein product [Oryza sativa Japonica G...   155   4e-36

>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine
           max]
          Length = 970

 Score =  196 bits (497), Expect = 2e-48
 Identities = 94/140 (67%), Positives = 114/140 (81%), Gaps = 4/140 (2%)
 Frame = -1

Query: 408 QCWKQHRVVPQDSFRVLPFSGLIICVTKVPADERKEMEKLVIQNGGSYSAELNKKCTHLV 229
           QC  +HRVVPQ+S++VLPFSGL ICVT +PAD RKEMEKL++QNGG YSAEL KKCTHL+
Sbjct: 169 QCSDEHRVVPQESYKVLPFSGLKICVTGIPADNRKEMEKLILQNGGKYSAELTKKCTHLI 228

Query: 228 CDAPEGDKYKVAKRWGHVHIVTRKWFDQSVSRKACLNEETYAVQATTTSTAKFS--LKVQ 55
            +APEGDKYKVAKRWGH+HIVTRKWFDQS++RKACLNEE +AVQ  + S+ K +  L +Q
Sbjct: 229 SEAPEGDKYKVAKRWGHIHIVTRKWFDQSIARKACLNEELFAVQHGSVSSHKVTRDLTMQ 288

Query: 54  HSQDK--LRKHSICSLSSLD 1
           HSQ+K   + HS  S  + D
Sbjct: 289 HSQEKDFGKLHSAASSGATD 308


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/140 (64%), Positives = 109/140 (77%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408 QCWKQHRVVPQDSFRVLPFSGLIICVTKVPADERKEMEKLVIQNGGSYSAELNKKCTHLV 229
           QCW +HRVVPQ+S+RVLPFSGL ICVTK+PADERKEME L+ QNGG YSA+L + CTHL+
Sbjct: 170 QCWTEHRVVPQESYRVLPFSGLTICVTKIPADERKEMEILIKQNGGKYSADLTRNCTHLI 229

Query: 228 CD--APEGDKYKVAKRWGHVHIVTRKWFDQSVSRKACLNEETYAVQATTTS---TAKFSL 64
            D  +PEGDKYKVA+RWGH+HIVTRKWFDQS++RKAC+NEE+Y VQ  T S   + +  L
Sbjct: 230 TDISSPEGDKYKVARRWGHIHIVTRKWFDQSIARKACVNEESYTVQGGTASSINSVRTHL 289

Query: 63  KVQHSQDKLRKHSICSLSSL 4
               SQDK   +   + SSL
Sbjct: 290 TASQSQDKSNVNFQSASSSL 309


>emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]
          Length = 972

 Score =  165 bits (418), Expect = 3e-39
 Identities = 69/103 (66%), Positives = 87/103 (84%)
 Frame = -1

Query: 408 QCWKQHRVVPQDSFRVLPFSGLIICVTKVPADERKEMEKLVIQNGGSYSAELNKKCTHLV 229
           +CW +HRVVPQ+ +++ PFSGL ICVT++PADERK MEK++ + GGSYSAEL K CTHL+
Sbjct: 167 RCWNEHRVVPQEPYKIPPFSGLTICVTRIPADERKGMEKVISEYGGSYSAELTKSCTHLI 226

Query: 228 CDAPEGDKYKVAKRWGHVHIVTRKWFDQSVSRKACLNEETYAV 100
            DA EGDKYKVA++WGH+ IVTRKWF QS+ +K CLNEE+Y V
Sbjct: 227 ADAAEGDKYKVARKWGHIQIVTRKWFQQSIDKKVCLNEESYPV 269


>ref|NP_177856.2| topoisomerase (DNA) II binding protein 1 [Arabidopsis thaliana]
           gi|332197842|gb|AEE35963.1| topoisomerase (DNA) II
           binding protein 1 [Arabidopsis thaliana]
          Length = 972

 Score =  165 bits (418), Expect = 3e-39
 Identities = 69/103 (66%), Positives = 87/103 (84%)
 Frame = -1

Query: 408 QCWKQHRVVPQDSFRVLPFSGLIICVTKVPADERKEMEKLVIQNGGSYSAELNKKCTHLV 229
           +CW +HRVVPQ+ +++ PFSGL ICVT++PADERK MEK++ + GGSYSAEL K CTHL+
Sbjct: 167 RCWNEHRVVPQEPYKIPPFSGLTICVTRIPADERKGMEKVISEYGGSYSAELTKSCTHLI 226

Query: 228 CDAPEGDKYKVAKRWGHVHIVTRKWFDQSVSRKACLNEETYAV 100
            DA EGDKYKVA++WGH+ IVTRKWF QS+ +K CLNEE+Y V
Sbjct: 227 ADAAEGDKYKVARKWGHIQIVTRKWFQQSIDKKVCLNEESYPV 269


>dbj|BAG91866.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 901

 Score =  155 bits (391), Expect = 4e-36
 Identities = 68/124 (54%), Positives = 92/124 (74%), Gaps = 2/124 (1%)
 Frame = -1

Query: 408 QCWKQHRVVPQDSFRVLPFSGLIICVTKVPADERKEMEKLVIQNGGSYSAELNKKCTHLV 229
           QCW +HRVVP + +R+ PFSGL IC+TK+  DER+E+ K+++QNGG YSA L ++CTHLV
Sbjct: 187 QCWIEHRVVPHEPYRIPPFSGLNICITKLNVDERRELAKIIVQNGGQYSANLTRRCTHLV 246

Query: 228 CDAPEGDKYKVAKRWGHVHIVTRKWFDQSVSRKACLNEETYAV--QATTTSTAKFSLKVQ 55
            + P GDKY VA++WG++HIV  KW DQSV+RK CL+E  Y V   +T  +  K SLK Q
Sbjct: 247 SNEPGGDKYVVAQKWGNIHIVVPKWIDQSVARKVCLDESAYLVCQNSTNINGVKHSLKEQ 306

Query: 54  HSQD 43
           H+ +
Sbjct: 307 HNPE 310