BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032450
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_740149.1| RNA polymerase alpha subunit [Daucus carota] gi...    72   4e-11
ref|YP_086997.1| RNA polymerase alpha subunit [Panax ginseng] gi...    71   1e-10
ref|YP_004935584.1| RNA polymerase alpha subunit (chloroplast) [...    69   4e-10
gb|ABU85224.1| RNA polymerase alpha subunit [Anethum graveolens]       55   6e-06

>ref|YP_740149.1| RNA polymerase alpha subunit [Daucus carota]
           gi|122239960|sp|Q0G9T0.1|RPOA_DAUCA RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|113200939|gb|ABI32455.1| RNA polymerase alpha subunit
           [Daucus carota]
          Length = 353

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/43 (83%), Positives = 40/43 (93%)
 Frame = +1

Query: 1   EHFRINDVKQILGILKKHFSIDLPKKSKMGFESLAQLIDSESG 129
           EHFRI DVKQILGIL+K+FSI+L KK KMGFESLAQLIDS+SG
Sbjct: 311 EHFRIKDVKQILGILEKNFSINLGKKPKMGFESLAQLIDSKSG 353


>ref|YP_086997.1| RNA polymerase alpha subunit [Panax ginseng]
           gi|68053096|sp|Q68RX5.1|RPOA_PANGI RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|51235344|gb|AAT98540.1| RNA polymerase alpha subunit
           [Panax ginseng]
          Length = 353

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/43 (81%), Positives = 38/43 (88%)
 Frame = +1

Query: 1   EHFRINDVKQILGILKKHFSIDLPKKSKMGFESLAQLIDSESG 129
           EHFRI DVK ILGIL+KHF+IDLPKK K+GFESLAQ I SESG
Sbjct: 311 EHFRIEDVKAILGILEKHFAIDLPKKLKIGFESLAQSIYSESG 353


>ref|YP_004935584.1| RNA polymerase alpha subunit (chloroplast) [Eleutherococcus
           senticosus] gi|347448239|gb|AEO92651.1| RNA polymerase
           alpha subunit (chloroplast) [Eleutherococcus senticosus]
          Length = 353

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +1

Query: 1   EHFRINDVKQILGILKKHFSIDLPKKSKMGFESLAQLIDSESG 129
           EHFRI DVK+ILGIL+K F+IDLPKK K+GFESLAQ I SESG
Sbjct: 311 EHFRIEDVKEILGILEKRFAIDLPKKLKIGFESLAQSIYSESG 353


>gb|ABU85224.1| RNA polymerase alpha subunit [Anethum graveolens]
          Length = 338

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   EHFRINDVKQILGILKKHFSIDLPKK 78
           EHFRINDVKQILGIL+KHFSIDLPKK
Sbjct: 313 EHFRINDVKQILGILEKHFSIDLPKK 338