BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032370
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21137.3| unnamed protein product [Vitis vinifera]              400   e-109
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   400   e-109
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   395   e-108
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   382   e-104
ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerase D sub...   372   e-101

>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  400 bits (1029), Expect = e-109
 Identities = 196/273 (71%), Positives = 223/273 (81%)
 Frame = -3

Query: 819  ECIDKLLFPKLIGIKQKARFLAYMVKCLLKAYTGRRKFDCRDDFRNKRLELASELLDREL 640
            ECI K LFP   G+KQKARFL YMVKCLL+AYTGRRK D RDDFRNKRLELA ELL+REL
Sbjct: 407  ECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLEREL 466

Query: 639  RVHINHAKRRMVKVMQXXXXXXXXXXRTMNRIEHYLDCSIITNGLSRAFSTGGWSHPYKR 460
            RVHI HA+RRMVK MQ            +  IE+YLD SIITNGLSRAFSTG WSHP+KR
Sbjct: 467  RVHIRHAERRMVKAMQRELYGDRD----LRPIENYLDASIITNGLSRAFSTGQWSHPFKR 522

Query: 459  AEKISGVVANLSRTNPLQSISEMRRTRQRVEYTGKIGGARYPHPSHWGKICFVSTPDGEN 280
             E+ISGVVA L RTNPLQ  ++MR+TRQ+V+YTGK+G ARYPHPSHWGK+CF+STPDGEN
Sbjct: 523  MERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 582

Query: 279  CGLIKNLASTGLVSTSILEPFIDKLLDSGMEELVDDTSTSLHGKNFIFLDGELVGGCDDS 100
            CGL+KNLA TGLVST +L+P +DKL D GME+LVDDTST L GKN +FLDG+ VG C+D 
Sbjct: 583  CGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDP 642

Query: 99   ASFVAKLRSMRRKKEVPSQVEIKRDEQQAEVRI 1
             SFV +LR+ RR KE+P QVEIKRDEQQ EVRI
Sbjct: 643  ISFVVELRTKRRHKELPQQVEIKRDEQQGEVRI 675


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  400 bits (1029), Expect = e-109
 Identities = 196/273 (71%), Positives = 223/273 (81%)
 Frame = -3

Query: 819  ECIDKLLFPKLIGIKQKARFLAYMVKCLLKAYTGRRKFDCRDDFRNKRLELASELLDREL 640
            ECI K LFP   G+KQKARFL YMVKCLL+AYTGRRK D RDDFRNKRLELA ELL+REL
Sbjct: 371  ECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLEREL 430

Query: 639  RVHINHAKRRMVKVMQXXXXXXXXXXRTMNRIEHYLDCSIITNGLSRAFSTGGWSHPYKR 460
            RVHI HA+RRMVK MQ            +  IE+YLD SIITNGLSRAFSTG WSHP+KR
Sbjct: 431  RVHIRHAERRMVKAMQRELYGDRD----LRPIENYLDASIITNGLSRAFSTGQWSHPFKR 486

Query: 459  AEKISGVVANLSRTNPLQSISEMRRTRQRVEYTGKIGGARYPHPSHWGKICFVSTPDGEN 280
             E+ISGVVA L RTNPLQ  ++MR+TRQ+V+YTGK+G ARYPHPSHWGK+CF+STPDGEN
Sbjct: 487  MERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 546

Query: 279  CGLIKNLASTGLVSTSILEPFIDKLLDSGMEELVDDTSTSLHGKNFIFLDGELVGGCDDS 100
            CGL+KNLA TGLVST +L+P +DKL D GME+LVDDTST L GKN +FLDG+ VG C+D 
Sbjct: 547  CGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDP 606

Query: 99   ASFVAKLRSMRRKKEVPSQVEIKRDEQQAEVRI 1
             SFV +LR+ RR KE+P QVEIKRDEQQ EVRI
Sbjct: 607  ISFVVELRTKRRHKELPQQVEIKRDEQQGEVRI 639


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron
           macrophyllum]
          Length = 1019

 Score =  395 bits (1016), Expect = e-108
 Identities = 197/271 (72%), Positives = 221/271 (81%)
 Frame = -3

Query: 813 IDKLLFPKLIGIKQKARFLAYMVKCLLKAYTGRRKFDCRDDFRNKRLELASELLDRELRV 634
           +   LFP L G +QKARFL YMVKCLL+AYTGRRK D RDDFRNKRLELA ELL+RELRV
Sbjct: 193 LSNYLFPNLSGFRQKARFLGYMVKCLLQAYTGRRKIDNRDDFRNKRLELAGELLERELRV 252

Query: 633 HINHAKRRMVKVMQXXXXXXXXXXRTMNRIEHYLDCSIITNGLSRAFSTGGWSHPYKRAE 454
           H+ HA+RRMVK MQ            ++ IEHYLD SIITNGLSRAFSTG WSHPYK+ E
Sbjct: 253 HVKHAERRMVKAMQRDLYGER----VIHAIEHYLDASIITNGLSRAFSTGAWSHPYKKME 308

Query: 453 KISGVVANLSRTNPLQSISEMRRTRQRVEYTGKIGGARYPHPSHWGKICFVSTPDGENCG 274
           +ISGVVA L RTNPLQ+I++MR+TRQ+V YTGK+G ARYPHPSHWGKICF+STPDGENCG
Sbjct: 309 RISGVVATLRRTNPLQTIADMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCG 368

Query: 273 LIKNLASTGLVSTSILEPFIDKLLDSGMEELVDDTSTSLHGKNFIFLDGELVGGCDDSAS 94
           L+KNLA TGLVST+I E F+DKLLDSGME+LVDDTST L GK  +FLDG  VG C DS S
Sbjct: 369 LVKNLAITGLVSTNIEEHFLDKLLDSGMEKLVDDTSTLLSGKVKVFLDGNWVGVCGDSVS 428

Query: 93  FVAKLRSMRRKKEVPSQVEIKRDEQQAEVRI 1
           FVA LR  RR+KEVP QVEIKRDEQ  EVR+
Sbjct: 429 FVAALRRKRRRKEVPHQVEIKRDEQHREVRV 459


>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  382 bits (982), Expect = e-104
 Identities = 189/273 (69%), Positives = 216/273 (79%)
 Frame = -3

Query: 819  ECIDKLLFPKLIGIKQKARFLAYMVKCLLKAYTGRRKFDCRDDFRNKRLELASELLDREL 640
            ECI+  LFP L G KQKARFL YMVKCLL ++ GRRK D RDDFRNKRLELA ELL+REL
Sbjct: 384  ECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLEREL 443

Query: 639  RVHINHAKRRMVKVMQXXXXXXXXXXRTMNRIEHYLDCSIITNGLSRAFSTGGWSHPYKR 460
            R HI HA+RRMVK MQ            +  IEHYLD SIITNGLSRAFSTG W HPYKR
Sbjct: 444  RAHIKHAERRMVKAMQRDLYGDRQ----VQPIEHYLDASIITNGLSRAFSTGHWCHPYKR 499

Query: 459  AEKISGVVANLSRTNPLQSISEMRRTRQRVEYTGKIGGARYPHPSHWGKICFVSTPDGEN 280
             E++SGVVA L RTNPLQ  ++MR++RQ+V YTGK+G ARYPHPSHWGK+CF+STPDGEN
Sbjct: 500  MERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGEN 559

Query: 279  CGLIKNLASTGLVSTSILEPFIDKLLDSGMEELVDDTSTSLHGKNFIFLDGELVGGCDDS 100
            CGL+KNLAS GLVST IL+PF++ L   GM++LVDD STSLHGK  + LDGE VG C+DS
Sbjct: 560  CGLVKNLASMGLVSTIILKPFLETLFRCGMQKLVDDCSTSLHGKQKVLLDGEWVGVCEDS 619

Query: 99   ASFVAKLRSMRRKKEVPSQVEIKRDEQQAEVRI 1
            A FV+KLR  RR+ EVP QVE+KRDE Q EVRI
Sbjct: 620  ALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRI 652


>ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Glycine
            max]
          Length = 1205

 Score =  372 bits (955), Expect = e-101
 Identities = 186/276 (67%), Positives = 221/276 (80%), Gaps = 3/276 (1%)
 Frame = -3

Query: 819  ECIDKLLFPKLIGIKQKARFLAYMVKCLLKAYTGRRKFDCRDDFRNKRLELASELLDREL 640
            EC++  +FP + G+ +KARFLAYMVK LL AYTGRRK D RDDFRNKRLELASELLDREL
Sbjct: 372  ECLEMYVFPGISGLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRLELASELLDREL 431

Query: 639  RVHINHAKRRMVKVMQXXXXXXXXXXRTMNRIEHYLDCSIITNGLSRAFSTGGWSHPYKR 460
            +VHI HA++RM K +Q            +  IEHYLD SIITNGL RAFSTG WSHPYKR
Sbjct: 432  KVHIAHARKRMAKALQRDLYGDRD----VRPIEHYLDASIITNGLQRAFSTGAWSHPYKR 487

Query: 459  AEKISGVVANLSRTNPLQSISEMRRTRQRVEYTGKIGGARYPHPSHWGKICFVSTPDGEN 280
             E+ISGVVAN+ RTNPLQ+++E+RR RQ+V+YTGK+G ARYPHPSHWGK+CF+STPDGEN
Sbjct: 488  MERISGVVANVGRTNPLQTMAELRRARQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 547

Query: 279  CGLIKNLASTGLVST---SILEPFIDKLLDSGMEELVDDTSTSLHGKNFIFLDGELVGGC 109
            CGL+KNLA TGLVST   ++ E  + KLLD GMEELVDDTST L  K+ + L+G+ VG C
Sbjct: 548  CGLVKNLAVTGLVSTDVSAVSEYILPKLLDCGMEELVDDTSTHLGNKDKVLLNGDWVGVC 607

Query: 108  DDSASFVAKLRSMRRKKEVPSQVEIKRDEQQAEVRI 1
             DS+SFVA+LRS RR+ E+P QVEIKRD+ Q EVRI
Sbjct: 608  PDSSSFVAELRSRRRRNELPHQVEIKRDQSQHEVRI 643