BLASTX nr result

ID: Angelica23_contig00032325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032325
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20254.3| unnamed protein product [Vitis vinifera]              115   3e-24
ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arab...   103   1e-20
ref|NP_172105.4| uncharacterized basic helix-loop-helix protein ...   100   2e-19
sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-c...   100   2e-19

>emb|CBI20254.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/95 (57%), Positives = 69/95 (72%)
 Frame = +1

Query: 88  NFMLNCLKRCSNLKELECLYALMIKNNAIQDCFYMNQFITACSTFRRTDYAVRAFAQMEF 267
           N +   +K+CS +KELE +YA MIK NA QDCF MNQFI ACS F R DYA+ AF  M+ 
Sbjct: 13  NHLAQQIKKCSMVKELESVYASMIKANANQDCFLMNQFIAACSIFHRIDYAILAFTHMQE 72

Query: 268 PNAFVYNAIIKSFVHCLNPVQALQFYISMLRAGVS 372
           PN FVYNA+I++ V C +PVQAL  Y+ M++A VS
Sbjct: 73  PNVFVYNAMIRALVQCYHPVQALDCYLDMVQAQVS 107


>ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|222843586|gb|EEE81133.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/77 (63%), Positives = 58/77 (75%)
 Frame = +1

Query: 142 LYALMIKNNAIQDCFYMNQFITACSTFRRTDYAVRAFAQMEFPNAFVYNAIIKSFVHCLN 321
           +YA+M+K N  QDC+ MNQFI+A STF R DYAV A+ QME PN FVYNA+IK FV    
Sbjct: 1   MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60

Query: 322 PVQALQFYISMLRAGVS 372
           PVQAL+ Y+ MLRA VS
Sbjct: 61  PVQALELYVQMLRANVS 77


>ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
            lyrata] gi|297338164|gb|EFH68581.1| hypothetical protein
            ARALYDRAFT_311694 [Arabidopsis lyrata subsp. lyrata]
          Length = 1329

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/89 (55%), Positives = 63/89 (70%)
 Frame = +1

Query: 106  LKRCSNLKELECLYALMIKNNAIQDCFYMNQFITACSTFRRTDYAVRAFAQMEFPNAFVY 285
            +K+CS  K LE   A MIK +  Q+C+ MNQFITACS+F R D AV    QM+ PN FVY
Sbjct: 787  IKQCSTPKLLESALAAMIKTSQTQNCYLMNQFITACSSFNRLDLAVSFMTQMQKPNVFVY 846

Query: 286  NAIIKSFVHCLNPVQALQFYISMLRAGVS 372
            NA+IK FV C +P+++L+FY+ MLR  VS
Sbjct: 847  NALIKGFVTCSHPIRSLEFYVRMLRDSVS 875


>ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
            gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity
            to an unknown protein T5J8.5 gi|4263522 from Arabidopsis
            thaliana BAC T5J8 gb|AC004044 and contains multiple PPR
            PF|01535 repeats. ESTs gb|AV565358, gb|AV558710,
            gb|AV524184 come from this gene [Arabidopsis thaliana]
            gi|332189826|gb|AEE27947.1| uncharacterized basic
            helix-loop-helix protein [Arabidopsis thaliana]
          Length = 1322

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/99 (50%), Positives = 66/99 (66%)
 Frame = +1

Query: 76   IAFPNFMLNCLKRCSNLKELECLYALMIKNNAIQDCFYMNQFITACSTFRRTDYAVRAFA 255
            +A PN +   +K+CS  K LE   A MIK +  QDC  MNQFITAC++F+R D AV    
Sbjct: 771  LAPPN-LKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMT 829

Query: 256  QMEFPNAFVYNAIIKSFVHCLNPVQALQFYISMLRAGVS 372
            QM+ PN FVYNA+ K FV C +P+++L+ Y+ MLR  VS
Sbjct: 830  QMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868


>sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
          Length = 577

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/99 (50%), Positives = 66/99 (66%)
 Frame = +1

Query: 76  IAFPNFMLNCLKRCSNLKELECLYALMIKNNAIQDCFYMNQFITACSTFRRTDYAVRAFA 255
           +A PN +   +K+CS  K LE   A MIK +  QDC  MNQFITAC++F+R D AV    
Sbjct: 26  LAPPN-LKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMT 84

Query: 256 QMEFPNAFVYNAIIKSFVHCLNPVQALQFYISMLRAGVS 372
           QM+ PN FVYNA+ K FV C +P+++L+ Y+ MLR  VS
Sbjct: 85  QMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 123


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