BLASTX nr result

ID: Angelica23_contig00032275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032275
         (1361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi...   366   7e-99
emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]   362   1e-97
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   361   2e-97
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   359   1e-96
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   356   9e-96

>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13150-like
            [Vitis vinifera]
          Length = 379

 Score =  366 bits (940), Expect = 7e-99
 Identities = 182/373 (48%), Positives = 255/373 (68%), Gaps = 2/373 (0%)
 Frame = +1

Query: 1    SSFTIRLQKFFSTAASETVISATKQTPKPN--KPISQLGKLKLLAXXXXXXXXXXXXXXX 174
            SS   RL+  F++      + AT +TP     +  S    LK +                
Sbjct: 2    SSLARRLRGIFTSP-----LPATTKTPAKTIKRSSSNNSSLKEMVDKFKKSSDSKRFRSR 56

Query: 175  IPYYESTVFRLAAAKQFSLIEDILEHQKQFEDITNERFTVRLISLYGKAGMFENARKVFD 354
              YYE  V  LA AK+FS IEDILEHQKQ+ +I+ E F VRL++LYGKAGMFE+A K+FD
Sbjct: 57   YGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFD 116

Query: 355  EMPELKCERTVLSFNALLSVCVNCKKFDKLEALFRDLPEKLGIKPDKVSYNTLIKSYCVM 534
            E+P+L CERTV+SFNALLSVCVN KKFDK++  F++LP  LG+ PD VSYN ++ ++C M
Sbjct: 117  ELPKLNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEM 176

Query: 535  GSLESAVGVVELMESNGLEPDLITFNTLFDALYRNKKMDDAEKLWALMESKNVVANVRSY 714
            GSL+SA+ V++ ME  GLEPDLITFNTL +A Y+N    D EK+W LM+  NV  NVRSY
Sbjct: 177  GSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSY 236

Query: 715  NPKLRALVADDRISEAVDLVEEMRTKGVMPDIYSFNALIQGFCTEMNLEQAKMWYEELAK 894
            N KLR +++++R+SEAV+L++EM+T G+ PD+++ N+L++GFC   NLE+AK WY E+A+
Sbjct: 237  NAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIAR 296

Query: 895  CDVAPDRVTYEIMLPFVCDMAQFDYAFELCKDVLNSRHRVSVSVIQRVVDGLAKDFKTEE 1074
             ++ P R TY  ++PF+ +   FD A ELCK+V + R  +  +++Q+V++GL K+ K EE
Sbjct: 297  NELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEE 356

Query: 1075 AKVLVDLANANNY 1113
            A  LV+LA    +
Sbjct: 357  ATELVELAKLKKF 369


>emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
          Length = 340

 Score =  362 bits (929), Expect = 1e-97
 Identities = 169/311 (54%), Positives = 234/311 (75%)
 Frame = +1

Query: 181  YYESTVFRLAAAKQFSLIEDILEHQKQFEDITNERFTVRLISLYGKAGMFENARKVFDEM 360
            YYE  V  LA AK+FS IEDILEHQKQ+ +I+ E F VRL++LYGKAGMFE+A K+FDE 
Sbjct: 20   YYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDEX 79

Query: 361  PELKCERTVLSFNALLSVCVNCKKFDKLEALFRDLPEKLGIKPDKVSYNTLIKSYCVMGS 540
            P+L CERTV+SFNALLSVCV  KKFDK++  F++LP  LG+ PD VSYN ++ ++C MGS
Sbjct: 80   PKLNCERTVVSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGS 139

Query: 541  LESAVGVVELMESNGLEPDLITFNTLFDALYRNKKMDDAEKLWALMESKNVVANVRSYNP 720
            L+SA+ V++ ME  GLEPDLITFNTL +A Y+N    D EK+W LM+  NV  NVRSYN 
Sbjct: 140  LDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNA 199

Query: 721  KLRALVADDRISEAVDLVEEMRTKGVMPDIYSFNALIQGFCTEMNLEQAKMWYEELAKCD 900
            KLR +++++R+SEAV+L++EM+T G+ PD+++ N+L++GFC   NLE+AK WY E+A+ +
Sbjct: 200  KLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNE 259

Query: 901  VAPDRVTYEIMLPFVCDMAQFDYAFELCKDVLNSRHRVSVSVIQRVVDGLAKDFKTEEAK 1080
            + P R TY  ++PF+ +   FD A ELCK+V + R  +  +++Q+V++GL K+ K EEA 
Sbjct: 260  LPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEAT 319

Query: 1081 VLVDLANANNY 1113
             LV+LA    +
Sbjct: 320  ELVELAKLKKF 330


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
            mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  361 bits (927), Expect = 2e-97
 Identities = 184/376 (48%), Positives = 248/376 (65%)
 Frame = +1

Query: 16   RLQKFFSTAASETVISATKQTPKPNKPISQLGKLKLLAXXXXXXXXXXXXXXXIPYYEST 195
            RL + FST+ + T   AT       K I +   LK L                   YE T
Sbjct: 7    RLYRAFSTSTAATA-QATGNLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEET 65

Query: 196  VFRLAAAKQFSLIEDILEHQKQFEDITNERFTVRLISLYGKAGMFENARKVFDEMPELKC 375
            V RLA+AK+F  IE+ILE QK+++DI+ E F VRLI+LYGK+GMF++A KVFDEMP+ KC
Sbjct: 66   VRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLITLYGKSGMFDHAFKVFDEMPDQKC 125

Query: 376  ERTVLSFNALLSVCVNCKKFDKLEALFRDLPEKLGIKPDKVSYNTLIKSYCVMGSLESAV 555
            ER+VLSFNALL  CVN KKFDK+E  F +LP KL ++PD VSYN +I   C MGS++SAV
Sbjct: 126  ERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNIVINGLCDMGSMDSAV 185

Query: 556  GVVELMESNGLEPDLITFNTLFDALYRNKKMDDAEKLWALMESKNVVANVRSYNPKLRAL 735
            G+++ ME   LEPDLITFNTL +  Y + +  D EK+W  ME KN++ ++RSYN KL  L
Sbjct: 186  GMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGL 245

Query: 736  VADDRISEAVDLVEEMRTKGVMPDIYSFNALIQGFCTEMNLEQAKMWYEELAKCDVAPDR 915
            V++ R+ E + LVEEM+TKG+ PD YSFNALI+GFC +  +++A  WY ++ + D  PD+
Sbjct: 246  VSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCLPDK 305

Query: 916  VTYEIMLPFVCDMAQFDYAFELCKDVLNSRHRVSVSVIQRVVDGLAKDFKTEEAKVLVDL 1095
            +T+  ++P  C+   FD AFELCK++ N +  V   ++Q  VDGL K  K  EAK LV L
Sbjct: 306  LTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQL 365

Query: 1096 ANANNYFHYKLKLQAE 1143
             N+N+Y  Y LK+  +
Sbjct: 366  GNSNSYRRYNLKIPTD 381


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
            mitochondrial [Vitis vinifera]
          Length = 383

 Score =  359 bits (921), Expect = 1e-96
 Identities = 185/377 (49%), Positives = 250/377 (66%), Gaps = 1/377 (0%)
 Frame = +1

Query: 16   RLQKFFSTAASETVISATKQTPKPNKPISQLGKLKLLAXXXXXXXXXXXXXXXIPYYEST 195
            RL + FST+ + T   AT       K I +   LK L                   YE T
Sbjct: 7    RLYRAFSTSTAATA-QATGNLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEET 65

Query: 196  VFRLAAAKQFSLIEDILEHQKQFEDITNERFTVRLISLYGKAGMFENARKVFDEMPELKC 375
            V RLA+AK+F  IE+ILE QK+++DI+ E F VRLISLYGK+GMF++A KVFDEMP+ KC
Sbjct: 66   VRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKC 125

Query: 376  ERTVLSFNALLSVCVNCKKFDKLEALFRDLPEKLGIKPDKVSYNTLIKSYCVMGSLESAV 555
            ER+VLSFNALL  CV+ KKFDK+E  F +LP KL ++PD VSYN +IK  C MGS++SAV
Sbjct: 126  ERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGSMDSAV 185

Query: 556  GVVELMESNGLEPDLITFNTLFDALYRNKKMDDAEKLWALMESKNVVANVRSYNPKLRAL 735
            G+++ ME   LEPDLITFNTL +  Y + +  D EK+W  ME KN++ ++RSYN KL  L
Sbjct: 186  GMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGL 245

Query: 736  VADD-RISEAVDLVEEMRTKGVMPDIYSFNALIQGFCTEMNLEQAKMWYEELAKCDVAPD 912
            V+ + R+ E + LVEEM+TKG+ PD YSFNALI+GFC +  +++A  WY ++ + D +PD
Sbjct: 246  VSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCSPD 305

Query: 913  RVTYEIMLPFVCDMAQFDYAFELCKDVLNSRHRVSVSVIQRVVDGLAKDFKTEEAKVLVD 1092
            ++T+  ++P  C+   FD AFELCK++ N +  V   ++Q  VDGL K  K  EAK LV 
Sbjct: 306  KLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQ 365

Query: 1093 LANANNYFHYKLKLQAE 1143
            L N+N+Y  Y LK+  +
Sbjct: 366  LGNSNSYRRYNLKIPTD 382


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  356 bits (913), Expect = 9e-96
 Identities = 184/377 (48%), Positives = 248/377 (65%), Gaps = 1/377 (0%)
 Frame = +1

Query: 16   RLQKFFSTAASETVISATKQTPKPNKPISQLGKLKLLAXXXXXXXXXXXXXXXIPYYEST 195
            RL + FST+ + T   AT       K I +   LK L                   YE T
Sbjct: 7    RLYRAFSTSTAATA-QATGNLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEET 65

Query: 196  VFRLAAAKQFSLIEDILEHQKQFEDITNERFTVRLISLYGKAGMFENARKVFDEMPELKC 375
            V RLA+AK+F  IE+ILE QK+++DI+ E F VRLISLYGK+GMF++A KVFDEMP+ KC
Sbjct: 66   VRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKC 125

Query: 376  ERTVLSFNALLSVCVNCKKFDKLEALFRDLPEKLGIKPDKVSYNTLIKSYCVMGSLESAV 555
            ER+VLSFN LL  CV  KKFDK+E  F +LP KL ++PD VSYN +IK  C MGS++SAV
Sbjct: 126  ERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGSMDSAV 185

Query: 556  GVVELMESNGLEPDLITFNTLFDALYRNKKMDDAEKLWALMESKNVVANVRSYNPKLRAL 735
            G+++ ME   LEPDLITFNTL +  Y + +  D EK+W  ME KN++ ++RSYN KL  L
Sbjct: 186  GMLDEMEKKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGL 245

Query: 736  VADD-RISEAVDLVEEMRTKGVMPDIYSFNALIQGFCTEMNLEQAKMWYEELAKCDVAPD 912
            V+ + R+ E + LVEEM+TKG+ PD YSFNALI+GFC +  +++A  WY ++ + D +PD
Sbjct: 246  VSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCSPD 305

Query: 913  RVTYEIMLPFVCDMAQFDYAFELCKDVLNSRHRVSVSVIQRVVDGLAKDFKTEEAKVLVD 1092
            ++T+  ++P  C+   FD AFELCK++ N +  V   ++Q  VDGL K  K  EAK LV 
Sbjct: 306  KLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLVQ 365

Query: 1093 LANANNYFHYKLKLQAE 1143
            L N+N+Y  Y LK+  +
Sbjct: 366  LGNSNSYRRYNLKIPTD 382


Top