BLASTX nr result

ID: Angelica23_contig00032271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032271
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630250.1| Zinc finger CCCH domain-containing protein [...    69   4e-10
ref|NP_188494.1| zinc finger CCCH domain-containing protein 38 [...    68   7e-10
dbj|BAD93829.1| hypothetical protein [Arabidopsis thaliana]            68   7e-10
ref|XP_004169343.1| PREDICTED: zinc finger CCCH domain-containin...    67   1e-09
ref|XP_004148674.1| PREDICTED: zinc finger CCCH domain-containin...    67   1e-09

>ref|XP_003630250.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355524272|gb|AET04726.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 779

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
 Frame = -2

Query: 443  AASSSEYDPVTDGLDLINSIISEEEAKMALTS---------ELPPTSNVFGVALHDTDRK 291
            A    +YDP+ D ++ +N  IS   A    +          E+PP  +  G    D+ +K
Sbjct: 594  AIGLKQYDPLFDSMEPMN--ISANGAPPTFSPSIKIPKNAVEIPPLLSNIGQNCDDSLKK 651

Query: 290  DAELMAVN---VTSRQSRGKEQFADCKDEKQNILKAGGSKEGKDGNKVANNEGDTDGKSL 120
            +   M      ++  ++   E+ +   D  QN        +G D  K        D K  
Sbjct: 652  ETNKMVAEEKPISQSENNITEENSPMGDMDQN--------DGPDEAKKTK-----DAKGS 698

Query: 119  RAFRSALVEFVKELLSPTWKEKKIEKEAYITIVKKVEDK 3
            RAF+S+LVE +KE+L PTWK+ KI KE Y TIVKKV DK
Sbjct: 699  RAFKSSLVELIKEILKPTWKDGKITKEDYKTIVKKVTDK 737


>ref|NP_188494.1| zinc finger CCCH domain-containing protein 38 [Arabidopsis
           thaliana] gi|75273386|sp|Q9LIH5.1|C3H38_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 38;
           Short=AtC3H38 gi|9294325|dbj|BAB02222.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|51969736|dbj|BAD43560.1| hypothetical protein
           [Arabidopsis thaliana] gi|332642604|gb|AEE76125.1| zinc
           finger CCCH domain-containing protein 38 [Arabidopsis
           thaliana]
          Length = 676

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/110 (37%), Positives = 59/110 (53%)
 Frame = -2

Query: 332 SNVFGVALHDTDRKDAELMAVNVTSRQSRGKEQFADCKDEKQNILKAGGSKEGKDGNKVA 153
           SNV  +     D K+      +  S++  GK+   D  D  +N++     ++G D     
Sbjct: 528 SNVEEIQEVSLDPKENGDKKTDEASKEEEGKKTGEDTNDA-ENVVDE--DEDGDDDGSDE 584

Query: 152 NNEGDTDGKSLRAFRSALVEFVKELLSPTWKEKKIEKEAYITIVKKVEDK 3
            N+ + D K +RAF+ ALVE VKELL P WKE K+ K+ Y  IVKKV +K
Sbjct: 585 ENKKEKDPKGMRAFKFALVEVVKELLKPAWKEGKLNKDGYKNIVKKVAEK 634


>dbj|BAD93829.1| hypothetical protein [Arabidopsis thaliana]
          Length = 152

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/110 (37%), Positives = 59/110 (53%)
 Frame = -2

Query: 332 SNVFGVALHDTDRKDAELMAVNVTSRQSRGKEQFADCKDEKQNILKAGGSKEGKDGNKVA 153
           SNV  +     D K+      +  S++  GK+   D  D  +N++     ++G D     
Sbjct: 4   SNVEEIQEVSLDPKENGDKKTDEASKEEEGKKTGEDTNDA-ENVVDE--DEDGDDDGSDE 60

Query: 152 NNEGDTDGKSLRAFRSALVEFVKELLSPTWKEKKIEKEAYITIVKKVEDK 3
            N+ + D K +RAF+ ALVE VKELL P WKE K+ K+ Y  IVKKV +K
Sbjct: 61  ENKKEKDPKGMRAFKFALVEVVKELLKPAWKEGKLNKDGYKNIVKKVAEK 110


>ref|XP_004169343.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
           [Cucumis sativus]
          Length = 432

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/79 (49%), Positives = 48/79 (60%)
 Frame = -2

Query: 239 EQFADCKDEKQNILKAGGSKEGKDGNKVANNEGDTDGKSLRAFRSALVEFVKELLSPTWK 60
           E   D +D ++N      +  G DG  V + +   D K +RAF+ ALVEFVKELL PTWK
Sbjct: 315 ENKTDPEDSQENDTTENAN--GNDG--VHDKKKSKDAKGIRAFKFALVEFVKELLKPTWK 370

Query: 59  EKKIEKEAYITIVKKVEDK 3
           E  I K+ Y TIVKKV DK
Sbjct: 371 EGHISKDVYKTIVKKVVDK 389


>ref|XP_004148674.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
           [Cucumis sativus]
          Length = 873

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/79 (49%), Positives = 48/79 (60%)
 Frame = -2

Query: 239 EQFADCKDEKQNILKAGGSKEGKDGNKVANNEGDTDGKSLRAFRSALVEFVKELLSPTWK 60
           E   D +D ++N      +  G DG  V + +   D K +RAF+ ALVEFVKELL PTWK
Sbjct: 756 ENKTDPEDSQENDTTENAN--GNDG--VHDKKKSKDAKGIRAFKFALVEFVKELLKPTWK 811

Query: 59  EKKIEKEAYITIVKKVEDK 3
           E  I K+ Y TIVKKV DK
Sbjct: 812 EGHISKDVYKTIVKKVVDK 830


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