BLASTX nr result
ID: Angelica23_contig00032230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00032230
(551 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 145 3e-40
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera] 133 9e-37
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers... 131 3e-36
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 128 9e-34
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 114 7e-33
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 145 bits (365), Expect(2) = 3e-40
Identities = 69/137 (50%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
Frame = -1
Query: 410 VLLLPLEMCRDMEKMMCTFWWKTSSKKDKNIHRMSWERMCKPKSEGGLGFRNLHEFNVAL 231
+LLLP ++CRD+E MM F+W S+ + ++I MSW +MCK K +GGLGFR L +FN+AL
Sbjct: 275 LLLLPKDLCRDIESMMNGFFWD-SNPQCRSIRWMSWGKMCKQKKDGGLGFRKLXDFNLAL 333
Query: 230 LGKHGWRLVTNPSCLVARIYKDRYYPQGSFLSAKLGGSPSFIWRSVMKAQNLIKQGLGCR 51
L K GWR + NP LV RI++ RY+ SFL+A+LG +PS++WRS++ AQ L+K+G
Sbjct: 334 LAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWS 393
Query: 50 V--GKSVSVLTDPWLPD 6
+ G V V D WLPD
Sbjct: 394 IASGTKVQVWGDSWLPD 410
Score = 45.4 bits (106), Expect(2) = 3e-40
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = -2
Query: 508 NRVQSWDGKLLTKGGKEILLKMVAQTIPNYARVCFFCP 395
NR+Q+W+G+ L++ GKEI LK VAQ+IP Y P
Sbjct: 242 NRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLP 279
>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
Length = 1793
Score = 133 bits (335), Expect(2) = 9e-37
Identities = 65/137 (47%), Positives = 93/137 (67%), Gaps = 2/137 (1%)
Frame = -1
Query: 410 VLLLPLEMCRDMEKMMCTFWWKTSSKKDKNIHRMSWERMCKPKSEGGLGFRNLHEFNVAL 231
+LLLP ++CRD+E MM F+W S+ + ++I MSW +MCK K +GGLGFR L +FN+AL
Sbjct: 1362 LLLLPKDLCRDIESMMNXFFWD-SNPQXRSIRWMSWXKMCKQKKDGGLGFRKLEDFNLAL 1420
Query: 230 LGKHGWRLVTNPSCLVARIYKDRYYPQGSFLSAKLGGSPSFIWRSVMKAQNLIKQGLGCR 51
L K G R + N LV I++ RY+ SFL+A+LG +PS++WRS++ AQ+L+K G
Sbjct: 1421 LAKQGXRFLQNLDSLVTIIFQARYFRNSSFLNAELGSNPSYMWRSILAAQDLLKMGCYWS 1480
Query: 50 V--GKSVSVLTDPWLPD 6
+ G V V D WLP+
Sbjct: 1481 IASGTKVQVWGDSWLPN 1497
Score = 45.4 bits (106), Expect(2) = 9e-37
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = -2
Query: 508 NRVQSWDGKLLTKGGKEILLKMVAQTIPNYARVCFFCP 395
NR+Q+W+G+ L++ GKEI LK VAQ+IP Y P
Sbjct: 1329 NRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLP 1366
>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 131 bits (330), Expect(2) = 3e-36
Identities = 64/138 (46%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Frame = -1
Query: 413 SVLLLPLEMCRDMEKMMCTFWWKTSSKKDKNIHRMSWERMCKPKSEGGLGFRNLHEFNVA 234
S LP C ++ M FWW + + K IH +SWE++C PK GGLGFR++ FN A
Sbjct: 654 SCFKLPKTTCTNLASAMADFWWSANDHQRK-IHWLSWEKLCLPKEHGGLGFRDIGLFNQA 712
Query: 233 LLGKHGWRLVTNPSCLVARIYKDRYYPQGSFLSAKLGGSPSFIWRSVMKAQNLIKQGLGC 54
LL K WRL+ P CL AR+ K RY+P G FL + +G PSF WRS++ ++L+ +GL
Sbjct: 713 LLAKQAWRLLQFPDCLFARLIKSRYFPVGEFLDSDVGSRPSFGWRSILHGRDLLCRGLVK 772
Query: 53 RV--GKSVSVLTDPWLPD 6
RV GKS+ V D WL D
Sbjct: 773 RVGNGKSIRVWIDYWLDD 790
Score = 45.8 bits (107), Expect(2) = 3e-36
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = -2
Query: 523 KIRFGNRVQSWDGKLLTKGGKEILLKMVAQTIPNYARVCFFCP 395
K+R +++ SW K L++GGKEI+LK VA +P +A CF P
Sbjct: 617 KVRLKSKLSSWFSKSLSQGGKEIMLKAVAMAMPVFAMSCFKLP 659
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 128 bits (322), Expect(2) = 9e-34
Identities = 54/133 (40%), Positives = 88/133 (66%), Gaps = 2/133 (1%)
Frame = -1
Query: 401 LPLEMCRDMEKMMCTFWWKTSSKKDKNIHRMSWERMCKPKSEGGLGFRNLHEFNVALLGK 222
L ++C + KM+ +WW K++K +H +SWE++ +PK GGLGFR++H FN+A+L K
Sbjct: 941 LTKDICEQISKMIARYWWSNQEKENK-MHWLSWEKLTEPKWAGGLGFRDIHAFNLAMLAK 999
Query: 221 HGWRLVTNPSCLVARIYKDRYYPQGSFLSAKLGGSPSFIWRSVMKAQNLIKQGLGCRVGK 42
GWRL+ NP L A++ K +YYP G+ SAK + S+ WRS+ + ++ G+ RVG
Sbjct: 1000 QGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYTWRSICRGLLTLRDGMIWRVGN 1059
Query: 41 --SVSVLTDPWLP 9
++++ +DPW+P
Sbjct: 1060 GAAINIWSDPWIP 1072
Score = 40.4 bits (93), Expect(2) = 9e-34
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 517 RFGNRVQSWDGKLLTKGGKEILLKMVAQTIPNYARVCF 404
R R+Q W KL ++ GKE+L+K VAQ IP +A CF
Sbjct: 903 RIWQRIQGWKEKL-SRTGKEVLIKAVAQAIPTFAMGCF 939
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 114 bits (285), Expect(2) = 7e-33
Identities = 50/129 (38%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Frame = -1
Query: 389 MCRDMEKMMCTFWWKTSSKKDKNIHRMSWERMCKPKSEGGLGFRNLHEFNVALLGKHGWR 210
+C ++ ++ +WW K +K IH +SWE++ + K +GGLGFR+LH FN+A+L + WR
Sbjct: 395 LCDELSSIIGRYWWSQQDKANK-IHWISWEKLTQSKEKGGLGFRDLHLFNLAMLSRQAWR 453
Query: 209 LVTNPSCLVARIYKDRYYPQGSFLSAKLGGSPSFIWRSVMKAQNLIKQGLGCRV--GKSV 36
L+TNP L ++ K RY+P L S+ WRS++K L+K+G+ R+ GK+V
Sbjct: 454 LLTNPDSLCGQVLKARYFPHSDILHCSPRPRISYTWRSILKGVALLKEGIIWRIGNGKNV 513
Query: 35 SVLTDPWLP 9
+ PW+P
Sbjct: 514 KIWEHPWIP 522
Score = 51.6 bits (122), Expect(2) = 7e-33
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = -2
Query: 523 KIRFGNRVQSWDGKLLTKGGKEILLKMVAQTIPNYARVCF 404
K + +R+Q W KLL+K GKEIL+K VAQ+IP YA CF
Sbjct: 350 KKKIWSRIQGWQEKLLSKAGKEILIKAVAQSIPTYAMSCF 389