BLASTX nr result

ID: Angelica23_contig00032187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032187
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92468.1| unknown [Populus trichocarpa]                           48   2e-06
ref|XP_001778517.1| predicted protein [Physcomitrella patens sub...    48   2e-06
ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|2...    48   2e-06
gb|AAG53614.1|AF285833_1 eukaryotic initiation factor 3H1 subuni...    48   6e-06
ref|XP_002892604.1| TIF3H1 [Arabidopsis lyrata subsp. lyrata] gi...    48   6e-06

>gb|ABK92468.1| unknown [Populus trichocarpa]
          Length = 341

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +3

Query: 111 KFRYYYRNLSCQQAQQQPWLQKRR 182
           KF+YYYRNLS QQAQQQ WLQKRR
Sbjct: 249 KFQYYYRNLSRQQAQQQAWLQKRR 272



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 1   IECMDDLLMEQQK 39
           IECMDDL MEQQK
Sbjct: 237 IECMDDLSMEQQK 249


>ref|XP_001778517.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162670115|gb|EDQ56690.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 335

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +3

Query: 111 KFRYYYRNLSCQQAQQQPWLQKRR 182
           KF+YYYRNLS QQAQQQ WLQKRR
Sbjct: 243 KFQYYYRNLSRQQAQQQAWLQKRR 266



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 1   IECMDDLLMEQQK 39
           IECMDDL MEQQK
Sbjct: 231 IECMDDLSMEQQK 243


>ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|222861210|gb|EEE98752.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +3

Query: 111 KFRYYYRNLSCQQAQQQPWLQKRR 182
           KF+YYYRNLS QQAQQQ WLQKRR
Sbjct: 241 KFQYYYRNLSRQQAQQQAWLQKRR 264



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 1   IECMDDLLMEQQK 39
           IECMDDL MEQQK
Sbjct: 229 IECMDDLSMEQQK 241


>gb|AAG53614.1|AF285833_1 eukaryotic initiation factor 3H1 subunit [Arabidopsis thaliana]
          Length = 337

 Score = 47.8 bits (112), Expect(2) = 6e-06
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +3

Query: 111 KFRYYYRNLSCQQAQQQPWLQKRR 182
           KF+YYYRNLS QQAQQQ WLQKRR
Sbjct: 245 KFQYYYRNLSRQQAQQQAWLQKRR 268



 Score = 26.9 bits (58), Expect(2) = 6e-06
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 1   IECMDDLLMEQQK 39
           I+CMDDL MEQQK
Sbjct: 233 IKCMDDLSMEQQK 245


>ref|XP_002892604.1| TIF3H1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338446|gb|EFH68863.1| TIF3H1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 337

 Score = 47.8 bits (112), Expect(2) = 6e-06
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +3

Query: 111 KFRYYYRNLSCQQAQQQPWLQKRR 182
           KF+YYYRNLS QQAQQQ WLQKRR
Sbjct: 245 KFQYYYRNLSRQQAQQQAWLQKRR 268



 Score = 26.9 bits (58), Expect(2) = 6e-06
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 1   IECMDDLLMEQQK 39
           I+CMDDL MEQQK
Sbjct: 233 IKCMDDLSMEQQK 245


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