BLASTX nr result
ID: Angelica23_contig00032187
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica23_contig00032187 (379 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK92468.1| unknown [Populus trichocarpa] 48 2e-06 ref|XP_001778517.1| predicted protein [Physcomitrella patens sub... 48 2e-06 ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|2... 48 2e-06 gb|AAG53614.1|AF285833_1 eukaryotic initiation factor 3H1 subuni... 48 6e-06 ref|XP_002892604.1| TIF3H1 [Arabidopsis lyrata subsp. lyrata] gi... 48 6e-06 >gb|ABK92468.1| unknown [Populus trichocarpa] Length = 341 Score = 47.8 bits (112), Expect(2) = 2e-06 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = +3 Query: 111 KFRYYYRNLSCQQAQQQPWLQKRR 182 KF+YYYRNLS QQAQQQ WLQKRR Sbjct: 249 KFQYYYRNLSRQQAQQQAWLQKRR 272 Score = 28.5 bits (62), Expect(2) = 2e-06 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +1 Query: 1 IECMDDLLMEQQK 39 IECMDDL MEQQK Sbjct: 237 IECMDDLSMEQQK 249 >ref|XP_001778517.1| predicted protein [Physcomitrella patens subsp. patens] gi|162670115|gb|EDQ56690.1| predicted protein [Physcomitrella patens subsp. patens] Length = 335 Score = 47.8 bits (112), Expect(2) = 2e-06 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = +3 Query: 111 KFRYYYRNLSCQQAQQQPWLQKRR 182 KF+YYYRNLS QQAQQQ WLQKRR Sbjct: 243 KFQYYYRNLSRQQAQQQAWLQKRR 266 Score = 28.5 bits (62), Expect(2) = 2e-06 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +1 Query: 1 IECMDDLLMEQQK 39 IECMDDL MEQQK Sbjct: 231 IECMDDLSMEQQK 243 >ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|222861210|gb|EEE98752.1| predicted protein [Populus trichocarpa] Length = 333 Score = 47.8 bits (112), Expect(2) = 2e-06 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = +3 Query: 111 KFRYYYRNLSCQQAQQQPWLQKRR 182 KF+YYYRNLS QQAQQQ WLQKRR Sbjct: 241 KFQYYYRNLSRQQAQQQAWLQKRR 264 Score = 28.5 bits (62), Expect(2) = 2e-06 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +1 Query: 1 IECMDDLLMEQQK 39 IECMDDL MEQQK Sbjct: 229 IECMDDLSMEQQK 241 >gb|AAG53614.1|AF285833_1 eukaryotic initiation factor 3H1 subunit [Arabidopsis thaliana] Length = 337 Score = 47.8 bits (112), Expect(2) = 6e-06 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = +3 Query: 111 KFRYYYRNLSCQQAQQQPWLQKRR 182 KF+YYYRNLS QQAQQQ WLQKRR Sbjct: 245 KFQYYYRNLSRQQAQQQAWLQKRR 268 Score = 26.9 bits (58), Expect(2) = 6e-06 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +1 Query: 1 IECMDDLLMEQQK 39 I+CMDDL MEQQK Sbjct: 233 IKCMDDLSMEQQK 245 >ref|XP_002892604.1| TIF3H1 [Arabidopsis lyrata subsp. lyrata] gi|297338446|gb|EFH68863.1| TIF3H1 [Arabidopsis lyrata subsp. lyrata] Length = 337 Score = 47.8 bits (112), Expect(2) = 6e-06 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = +3 Query: 111 KFRYYYRNLSCQQAQQQPWLQKRR 182 KF+YYYRNLS QQAQQQ WLQKRR Sbjct: 245 KFQYYYRNLSRQQAQQQAWLQKRR 268 Score = 26.9 bits (58), Expect(2) = 6e-06 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +1 Query: 1 IECMDDLLMEQQK 39 I+CMDDL MEQQK Sbjct: 233 IKCMDDLSMEQQK 245