BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032179
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]        246   5e-63
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   246   5e-63
ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   243   3e-62
ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arab...   242   6e-62
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24...   239   5e-61

>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 326

 Score =  246 bits (627), Expect = 5e-63
 Identities = 116/143 (81%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
 Frame = -3

Query: 772 GCSWMELRPLTSRKHQIRVHCAEALGTPIVGDYKYGWFTHCRWKQMPRVDIEPTTGKPYK 593
           GCSW+ELRP+TSRKHQ+RVHCAEALGTPIVGDYKYGWF H RWKQMP+VDIEPTTGKPYK
Sbjct: 186 GCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYK 245

Query: 592 MRRPNGLDVQKGSVLSKVPLLHMHCRELVLPNVAKFIELHKNTSETTQKSHDN-YTKPDL 416
           +RRP GLDVQKGSVLSKVPLLH+HCRE+VLPN+AKF  LH    + T+  H     KPDL
Sbjct: 246 LRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKF--LHVMNQQETEPLHTGIIDKPDL 303

Query: 415 LRFVASMPSHMKISWNLMSSYLV 347
           LRFVASMPSHMKISWNLMSSYLV
Sbjct: 304 LRFVASMPSHMKISWNLMSSYLV 326


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
           gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
           pseudourine synthase 3, mitochondrial; AltName: Full=RNA
           pseudouridylate synthase 3; AltName: Full=RNA-uridine
           isomerase 3; Flags: Precursor gi|53850479|gb|AAU95416.1|
           At1g78910 [Arabidopsis thaliana]
           gi|56790228|gb|AAW30031.1| At1g78910 [Arabidopsis
           thaliana] gi|332198052|gb|AEE36173.1| RNA pseudourine
           synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  246 bits (627), Expect = 5e-63
 Identities = 116/143 (81%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
 Frame = -3

Query: 772 GCSWMELRPLTSRKHQIRVHCAEALGTPIVGDYKYGWFTHCRWKQMPRVDIEPTTGKPYK 593
           GCSW+ELRP+TSRKHQ+RVHCAEALGTPIVGDYKYGWF H RWKQMP+VDIEPTTGKPYK
Sbjct: 338 GCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYK 397

Query: 592 MRRPNGLDVQKGSVLSKVPLLHMHCRELVLPNVAKFIELHKNTSETTQKSHDN-YTKPDL 416
           +RRP GLDVQKGSVLSKVPLLH+HCRE+VLPN+AKF  LH    + T+  H     KPDL
Sbjct: 398 LRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKF--LHVMNQQETEPLHTGIIDKPDL 455

Query: 415 LRFVASMPSHMKISWNLMSSYLV 347
           LRFVASMPSHMKISWNLMSSYLV
Sbjct: 456 LRFVASMPSHMKISWNLMSSYLV 478


>ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Glycine
           max]
          Length = 554

 Score =  243 bits (620), Expect = 3e-62
 Identities = 113/142 (79%), Positives = 126/142 (88%)
 Frame = -3

Query: 772 GCSWMELRPLTSRKHQIRVHCAEALGTPIVGDYKYGWFTHCRWKQMPRVDIEPTTGKPYK 593
           GCSW+ELRPLT RKHQ+RVHCAEALGTPIVGDYKYGWF H RWKQMPRVDIEPTTGKPYK
Sbjct: 415 GCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYK 474

Query: 592 MRRPNGLDVQKGSVLSKVPLLHMHCRELVLPNVAKFIELHKNTSETTQKSHDNYTKPDLL 413
           +RRP GLDVQKGSVLSKVPLLH+HCRELVLPN+ KF+ +  N+SE  + S     +PD+L
Sbjct: 475 LRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRTSLRE--QPDVL 532

Query: 412 RFVASMPSHMKISWNLMSSYLV 347
           RFVA+MPSHM+ISWNLMSSYLV
Sbjct: 533 RFVATMPSHMRISWNLMSSYLV 554


>ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp.
           lyrata] gi|297333602|gb|EFH64020.1| hypothetical protein
           ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score =  242 bits (618), Expect = 6e-62
 Identities = 114/142 (80%), Positives = 124/142 (87%)
 Frame = -3

Query: 772 GCSWMELRPLTSRKHQIRVHCAEALGTPIVGDYKYGWFTHCRWKQMPRVDIEPTTGKPYK 593
           GCSW+ELRP+TSRKHQ+RVHCAEALGT IVGDYKYGWF H RWKQMP+VDIEPTTGKPYK
Sbjct: 337 GCSWLELRPITSRKHQLRVHCAEALGTSIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYK 396

Query: 592 MRRPNGLDVQKGSVLSKVPLLHMHCRELVLPNVAKFIELHKNTSETTQKSHDNYTKPDLL 413
           +RRP GLDVQKGSVLSKVPLLH+HCRE+VLPN+AKF+ +  N  ET         KPDLL
Sbjct: 397 LRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHV-LNQQETEPLRTGIIDKPDLL 455

Query: 412 RFVASMPSHMKISWNLMSSYLV 347
           RFVASMPSHMKISWNLMSSYLV
Sbjct: 456 RFVASMPSHMKISWNLMSSYLV 477


>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
           surA-hepA intergenic region yab0 from Escherichia coli
           genome gb|AE000116, and to hypothetical YABO family
           PF|00849 [Arabidopsis thaliana]
          Length = 491

 Score =  239 bits (610), Expect = 5e-61
 Identities = 116/149 (77%), Positives = 126/149 (84%), Gaps = 7/149 (4%)
 Frame = -3

Query: 772 GCSWMELRPLTSRKHQ------IRVHCAEALGTPIVGDYKYGWFTHCRWKQMPRVDIEPT 611
           GCSW+ELRP+TSRKHQ      +RVHCAEALGTPIVGDYKYGWF H RWKQMP+VDIEPT
Sbjct: 345 GCSWVELRPITSRKHQPPSKKQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPT 404

Query: 610 TGKPYKMRRPNGLDVQKGSVLSKVPLLHMHCRELVLPNVAKFIELHKNTSETTQKSHDN- 434
           TGKPYK+RRP GLDVQKGSVLSKVPLLH+HCRE+VLPN+AKF  LH    + T+  H   
Sbjct: 405 TGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKF--LHVMNQQETEPLHTGI 462

Query: 433 YTKPDLLRFVASMPSHMKISWNLMSSYLV 347
             KPDLLRFVASMPSHMKISWNLMSSYLV
Sbjct: 463 IDKPDLLRFVASMPSHMKISWNLMSSYLV 491