BLASTX nr result

ID: Angelica23_contig00032117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032117
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ...    94   9e-18
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ...    92   3e-17
ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit ...    92   3e-17
ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit ...    91   7e-17
ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati...    89   4e-16

>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
           gi|296090247|emb|CBI40066.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/99 (48%), Positives = 66/99 (66%)
 Frame = -2

Query: 301 MDVVESIISHIQALSNSPXXXXXXXXXLRRSQKQISTESTRLFSALSQLDPSIHSLGYLY 122
           MD VE++++ IQ LS            L+++   +  ESTRL   L QLDPSIH+LGYLY
Sbjct: 1   MDSVEAVVTQIQGLSGGSGDISLLHSLLKQADDLLHNESTRLAPFLEQLDPSIHTLGYLY 60

Query: 121 ILDGYTSSPNSKEQANEVVTIVARFIRTCSAKQINLAPE 5
           +L+  TS+P  KEQAN++V  +A FI  CSA+QI+LAP+
Sbjct: 61  LLEACTSTPIPKEQANQLVLSIANFINNCSAEQIHLAPD 99


>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2
           [Glycine max]
          Length = 423

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/99 (48%), Positives = 66/99 (66%)
 Frame = -2

Query: 301 MDVVESIISHIQALSNSPXXXXXXXXXLRRSQKQISTESTRLFSALSQLDPSIHSLGYLY 122
           MD +E++++ IQ LS+SP         L+++   + +ESTRL   L+QLDPSIHSLG+LY
Sbjct: 1   MDPLEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLY 60

Query: 121 ILDGYTSSPNSKEQANEVVTIVARFIRTCSAKQINLAPE 5
           IL+   + P +K QA  VV IV RFI  CS +QI LAP+
Sbjct: 61  ILEASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPD 99


>ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1
           [Glycine max]
          Length = 423

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/99 (48%), Positives = 66/99 (66%)
 Frame = -2

Query: 301 MDVVESIISHIQALSNSPXXXXXXXXXLRRSQKQISTESTRLFSALSQLDPSIHSLGYLY 122
           MD +E++++ IQ LS+SP         L+++   + +ESTRL   L+QLDPSIHSLG+LY
Sbjct: 1   MDPLEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLY 60

Query: 121 ILDGYTSSPNSKEQANEVVTIVARFIRTCSAKQINLAPE 5
           IL+   + P +K QA  VV IV RFI  CS +QI LAP+
Sbjct: 61  ILEASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPD 99


>ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1
           [Glycine max]
          Length = 423

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/99 (47%), Positives = 66/99 (66%)
 Frame = -2

Query: 301 MDVVESIISHIQALSNSPXXXXXXXXXLRRSQKQISTESTRLFSALSQLDPSIHSLGYLY 122
           MD +E++++ IQ LS++P         L+++   + +ESTRL   L+QLDPSIHSLG+LY
Sbjct: 1   MDPLEALVAQIQGLSSTPGDLTRLHSVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLY 60

Query: 121 ILDGYTSSPNSKEQANEVVTIVARFIRTCSAKQINLAPE 5
           IL+   + P +K QA  VV IV RFI  CS +QI LAP+
Sbjct: 61  ILEASMTDPVTKTQAETVVPIVTRFIGACSPEQIRLAPD 99


>ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
           gi|223549455|gb|EEF50943.1| 26S proteasome regulatory
           subunit S3, putative [Ricinus communis]
          Length = 427

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/101 (46%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
 Frame = -2

Query: 304 NMDVVESIISHIQALSNSPXXXXXXXXXLRRSQKQISTES-TRLFSALSQLDPSIHSLGY 128
           N   +ES+++ IQ LS+S          L+++   + ++S TRL   L QLDPS+HSLGY
Sbjct: 2   NSGSIESLVTQIQGLSSSATDISALHNYLKQADDSLHSDSPTRLLPFLDQLDPSVHSLGY 61

Query: 127 LYILDGYTSSPNSKEQANEVVTIVARFIRTCSAKQINLAPE 5
           LY L+  TS P SKEQA  +V I+ARF+ +C+A QI LAP+
Sbjct: 62  LYFLEACTSGPISKEQARTLVLILARFVTSCAADQIRLAPD 102


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