BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032054
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   103   1e-20

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  103 bits (258), Expect = 1e-20
 Identities = 64/153 (41%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
 Frame = -3

Query: 451 LLELGSHFRIEEALRTQEIENNPKGKNQVGNSSVNMVEXXXXXXXXXXXXXXXXXXXXXX 272
           L++LGSH RIEE+LR QE    PK K +   SS+NM++                      
Sbjct: 129 LVQLGSHLRIEESLRVQE-GGKPKDK-EAETSSINMMKESGSSKMKNKGKKRPFTNNTND 186

Query: 271 XXXXXXXXKMACWKCGKPGHFKKDCRVGKGK---QEKQNAGPSGSKDLEKQQGQILIQNC 101
                      CW C KPGHFK+DCR  K K   Q+K+    S  +D    QGQ  + + 
Sbjct: 187 GSNKRFKS--VCWICNKPGHFKRDCRAAKDKNKMQQKRFGQGSKDQDPSSHQGQNSVFDL 244

Query: 100 NSGQNYVSLISEAFYVQVDNVAWWIDSGATSHV 2
           +S   YVS I+E FYVQ D VAWWIDSGAT HV
Sbjct: 245 HSKVYYVSKIAEVFYVQDDEVAWWIDSGATIHV 277