BLASTX nr result

ID: Angelica23_contig00032004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00032004
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24
emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]   115   3e-24
ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|2...   102   5e-20
ref|NP_001190774.1| Pentatricopeptide repeat domain-containing p...    99   4e-19
emb|CAB52870.1| putative protein [Arabidopsis thaliana] gi|72687...    99   4e-19

>ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/91 (63%), Positives = 69/91 (75%)
 Frame = +3

Query: 258 IKTICSLVCQSYFQNQTHFKSTPPKXXXXXXXXXXXXEQAITIVASLSDEAGSMVALSFF 437
           ++TICSLVCQSY+Q QTH + TPPK            +QAIT+VASL+DEAGSMVALSF 
Sbjct: 63  VRTICSLVCQSYYQ-QTHVRFTPPKLHLPLDSESLTHDQAITVVASLADEAGSMVALSFL 121

Query: 438 YWAIGFHKFRYFLRFYIVLASSLIENDNAER 530
           YWAIGF KFR+F+R YIV A++LI N N ER
Sbjct: 122 YWAIGFPKFRHFMRLYIVSATALIGNKNLER 152


>emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/91 (63%), Positives = 69/91 (75%)
 Frame = +3

Query: 258 IKTICSLVCQSYFQNQTHFKSTPPKXXXXXXXXXXXXEQAITIVASLSDEAGSMVALSFF 437
           ++TICSLVCQSY+Q QTH + TPPK            +QAIT+VASL+DEAGSMVALSF 
Sbjct: 63  VRTICSLVCQSYYQ-QTHVRFTPPKLHLPLDSESLTHDQAITVVASLADEAGSMVALSFL 121

Query: 438 YWAIGFHKFRYFLRFYIVLASSLIENDNAER 530
           YWAIGF KFR+F+R YIV A++LI N N ER
Sbjct: 122 YWAIGFPKFRHFMRLYIVSATALIGNKNLER 152


>ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|222869372|gb|EEF06503.1|
           predicted protein [Populus trichocarpa]
          Length = 715

 Score =  102 bits (253), Expect = 5e-20
 Identities = 53/92 (57%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
 Frame = +3

Query: 258 IKTICSLVCQSYFQNQTHFKSTP-PKXXXXXXXXXXXXEQAITIVASLSDEAGSMVALSF 434
           +++ICSLVC+SY Q   H +    P             EQAIT+VASL+ EAGSMVALSF
Sbjct: 68  VRSICSLVCESYSQQTPHVRLLQSPSINLSVNPDSLTHEQAITVVASLASEAGSMVALSF 127

Query: 435 FYWAIGFHKFRYFLRFYIVLASSLIENDNAER 530
           F WAIGF KFRYF+RFYIV A+S I N+N ER
Sbjct: 128 FNWAIGFPKFRYFMRFYIVCATSFIGNENFER 159


>ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana] gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g19890 gi|332658842|gb|AEE84242.1| Pentatricopeptide
           repeat domain-containing protein [Arabidopsis thaliana]
          Length = 701

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/91 (51%), Positives = 63/91 (69%)
 Frame = +3

Query: 258 IKTICSLVCQSYFQNQTHFKSTPPKXXXXXXXXXXXXEQAITIVASLSDEAGSMVALSFF 437
           +K++CSLVC SY + Q H  S+P +            EQAIT+VASL+ E+GSMVAL FF
Sbjct: 56  VKSVCSLVCTSYLR-QNHVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFF 114

Query: 438 YWAIGFHKFRYFLRFYIVLASSLIENDNAER 530
           YWA+GF KFR+F+R Y+V A SL+ N N ++
Sbjct: 115 YWAVGFEKFRHFMRLYLVTADSLLANGNLQK 145


>emb|CAB52870.1| putative protein [Arabidopsis thaliana] gi|7268785|emb|CAB78991.1|
           putative protein [Arabidopsis thaliana]
          Length = 1302

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/91 (51%), Positives = 63/91 (69%)
 Frame = +3

Query: 258 IKTICSLVCQSYFQNQTHFKSTPPKXXXXXXXXXXXXEQAITIVASLSDEAGSMVALSFF 437
           +K++CSLVC SY + Q H  S+P +            EQAIT+VASL+ E+GSMVAL FF
Sbjct: 657 VKSVCSLVCTSYLR-QNHVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFF 715

Query: 438 YWAIGFHKFRYFLRFYIVLASSLIENDNAER 530
           YWA+GF KFR+F+R Y+V A SL+ N N ++
Sbjct: 716 YWAVGFEKFRHFMRLYLVTADSLLANGNLQK 746


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