BLASTX nr result

ID: Angelica23_contig00031339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00031339
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]   151   6e-35
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   144   1e-32
ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32

>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  152 bits (384), Expect = 3e-35
 Identities = 68/90 (75%), Positives = 80/90 (88%)
 Frame = +1

Query: 1   CGSIDDAGCAFSEVSHRGIVSWSSMIGGLAQHGHGKEAIHLFSEMLKDGISPNHVTLASV 180
           CGSI+DA  AFSE+ +RGIVSWS+MIGG AQHGHGKEA+ LF++ML+DG+ PNH+TL SV
Sbjct: 534 CGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSV 593

Query: 181 LCACNHAGLVNEAKKYFETMEELFGIKPTQ 270
           LCACNHAGLVNE K+YFE ME +FGIKPTQ
Sbjct: 594 LCACNHAGLVNEGKQYFEKMEVMFGIKPTQ 623


>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/90 (76%), Positives = 81/90 (90%)
 Frame = +1

Query: 1   CGSIDDAGCAFSEVSHRGIVSWSSMIGGLAQHGHGKEAIHLFSEMLKDGISPNHVTLASV 180
           CGSIDDAG AFSE++ RGIVSWS+MIGGLAQHGHG++A+ LF++MLK+G+SPNH+TL SV
Sbjct: 609 CGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSV 668

Query: 181 LCACNHAGLVNEAKKYFETMEELFGIKPTQ 270
           L ACNHAGLV EAK YFE+MEELFG KP Q
Sbjct: 669 LGACNHAGLVTEAKLYFESMEELFGFKPMQ 698



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/68 (39%), Positives = 39/68 (57%)
 Frame = +1

Query: 4   GSIDDAGCAFSEVSHRGIVSWSSMIGGLAQHGHGKEAIHLFSEMLKDGISPNHVTLASVL 183
           G + DA   F ++    IVSW+++I G   H H ++A+ L  +M + GI PN  TL+S L
Sbjct: 307 GDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSAL 366

Query: 184 CACNHAGL 207
            AC   GL
Sbjct: 367 KACAGMGL 374


>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/90 (76%), Positives = 81/90 (90%)
 Frame = +1

Query: 1   CGSIDDAGCAFSEVSHRGIVSWSSMIGGLAQHGHGKEAIHLFSEMLKDGISPNHVTLASV 180
           CGSIDDAG AFSE++ RGIVSWS+MIGGLAQHGHG++A+ LF++MLK+G+SPNH+TL SV
Sbjct: 582 CGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSV 641

Query: 181 LCACNHAGLVNEAKKYFETMEELFGIKPTQ 270
           L ACNHAGLV EAK YFE+MEELFG KP Q
Sbjct: 642 LGACNHAGLVTEAKLYFESMEELFGFKPMQ 671


>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/90 (72%), Positives = 78/90 (86%)
 Frame = +1

Query: 1   CGSIDDAGCAFSEVSHRGIVSWSSMIGGLAQHGHGKEAIHLFSEMLKDGISPNHVTLASV 180
           CGSIDDA C F+E+S RGIVSWS+MIGGLAQHGHG++A+ LF +MLK+GI PNH+TL SV
Sbjct: 539 CGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSV 598

Query: 181 LCACNHAGLVNEAKKYFETMEELFGIKPTQ 270
           L ACNHAGLV EA+++F  ME+LFGI PTQ
Sbjct: 599 LSACNHAGLVTEARRFFGLMEKLFGITPTQ 628


>ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|222848084|gb|EEE85631.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/90 (72%), Positives = 76/90 (84%)
 Frame = +1

Query: 1   CGSIDDAGCAFSEVSHRGIVSWSSMIGGLAQHGHGKEAIHLFSEMLKDGISPNHVTLASV 180
           CGSI+DA CAFS +  RGIVSWS+MIGGLAQHG+GKEA+ LF +MLK G+ PNH+TL SV
Sbjct: 462 CGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSV 521

Query: 181 LCACNHAGLVNEAKKYFETMEELFGIKPTQ 270
           LCACNHAGLV EAK YF +M+ LFGI+P Q
Sbjct: 522 LCACNHAGLVAEAKHYFNSMKILFGIEPMQ 551



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = +1

Query: 4   GSIDDAGCAFSEVSHRGIVSWSSMIGGLAQHGHGKEAIHLFSEMLKDGISPNHVTLASVL 183
           G ++DA   F E++   IVSW+++I G   H +   A+ L  EM K G+ PN  TL+S L
Sbjct: 160 GILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSAL 219

Query: 184 CAC 192
            AC
Sbjct: 220 KAC 222


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