BLASTX nr result

ID: Angelica23_contig00031324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00031324
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    68   7e-10
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    65   4e-09
ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A...    65   6e-09
ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204...    64   1e-08
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    64   2e-08

>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = +1

Query: 133 EDKVVWRSRDGK-KSRFKSTTVWNDFREAHPRVEWCNLV*FSNTIPKHAFILWLAIQNKL 309
           ED V+W+ + G+ K  F +   W D RE  PR EW   + FS+  PK++FI WLA +N+L
Sbjct: 241 EDVVLWKGKGGRFKPSFSTKETWADTREQKPRNEWYQGIWFSHATPKYSFITWLATKNRL 300

Query: 310 LTQDRMQAW 336
            T DRM +W
Sbjct: 301 STGDRMMSW 309


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = +1

Query: 133 EDKVVWRSRDGK-KSRFKSTTVWNDFREAHPRVEWCNLV*FSNTIPKHAFILWLAIQNKL 309
           ED+ +W+ ++ + +S F +   WN  R    +V W   V F+  IPKHAF +WLA+ N+L
Sbjct: 271 EDRALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRL 330

Query: 310 LTQDRMQAW 336
            T DRM  W
Sbjct: 331 STGDRMTLW 339


>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 342

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
 Frame = +1

Query: 10  GSNVKAKVADF-ARNGQ---VIFPEELINIWPELLGKVIFLSDNKEDKVVWRSRDGKKSR 177
           GS    ++ DF  RNG     +   +L++IW  + G  +  S + ED+ VW    G +  
Sbjct: 125 GSRWDVRLVDFMGRNGDWRWSLVSLDLMDIWDRVQG--VRPSPSVEDRWVWVP--GSRDS 180

Query: 178 FKSTTVWNDFREAHPRVEWCNLV*FSNTIPKHAFILWLAIQNKLLTQDRMQAW 336
           F  T+ W   R    RV W  L+     IPKH+F  WLAI+++L T+DR+  W
Sbjct: 181 FSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLSTRDRLSRW 233


>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
          Length = 282

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
 Frame = +1

Query: 10  GSNVKAKVADF-ARNGQVIFPE---ELINIWPELLGKVIFLSDNKEDKVVWRSRDGKKSR 177
           GS   A++ DF  R+G   +P    +L++IW  + G  + LS + ED+ VW    G    
Sbjct: 52  GSRWDARLVDFMGRDGDWRWPLVYLDLMDIWDRVQG--VRLSPSVEDRWVWVP--GSHDS 107

Query: 178 FKSTTVWNDFREAHPRVEWCNLV*FSNTIPKHAFILWLAIQNKLLTQDRMQAW 336
           F  T+ W   R    RV W  L+     IPKH+F  WLAI+++L T+ R+  W
Sbjct: 108 FSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLGTRGRLSRW 160


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = +1

Query: 133 EDKVVWRSRDGK-KSRFKSTTVWNDFREAHPRVEWCNLV*FSNTIPKHAFILWLAIQNKL 309
           ED  +W+ ++ + +S F +   WN  R    +V W   V F+  IPKHAF +WLA+ N+L
Sbjct: 352 EDCALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRL 411

Query: 310 LTQDRMQAW 336
            T DRM  W
Sbjct: 412 STGDRMTLW 420


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