BLASTX nr result

ID: Angelica23_contig00031306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00031306
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...   155   1e-35
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...   141   2e-31
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...   135   2e-29
ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798...   117   5e-24
ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cuc...   115   2e-23

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score =  155 bits (393), Expect = 1e-35
 Identities = 78/152 (51%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
 Frame = -3

Query: 681 PQQCSYKNHLQECAQKACIHLPSYNTINVGSQHAPKFRSLVVFNGEIYRSQNVFSHKKTA 502
           P+   +KN LQE  Q++ I LP Y T+N G QHAPKFRS V+ +G  Y S N FSH+K A
Sbjct: 18  PEHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATYTSPNTFSHRKAA 77

Query: 501 EMDAARIALVSLGCLRPRIREESCLLGQEDTILCKTILHEYAVKINVQKPMYIT-EMHGS 325
           E D AR+AL  +     +I++E C L +EDT+ CK+IL+E+AVK+N++KP Y T +  G 
Sbjct: 78  EQDVARLALEFIS---KKIKDEGCPLIREDTVFCKSILNEFAVKMNLEKPTYTTVQPEGL 134

Query: 324 PPIFVSSLIFNGKHYVAQGGMNKKESQQLVAR 229
            P+FVSSL+FNG  Y    G NKKE++QL AR
Sbjct: 135 LPVFVSSLVFNGVTYTGDAGRNKKEAEQLAAR 166


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  141 bits (356), Expect = 2e-31
 Identities = 72/152 (47%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
 Frame = -3

Query: 681 PQQCSYKNHLQECAQKACIHLPSYNTINVGSQHAPKFRSLVVFNGEIYRSQNVFSHKKTA 502
           P    YKN LQE  QK+ + LP Y T+N G  H P+FRS V  +G  YRSQ  F H+K A
Sbjct: 135 PDNLMYKNRLQEYTQKSSLQLPVYQTLNEGPAHMPRFRSTVWVDGARYRSQKTFLHRKAA 194

Query: 501 EMDAARIALVSLGCLRPRIREESCLLGQEDTILCKTILHEYAVKINVQKPMYIT-EMHGS 325
           E D A +AL S   +  R+++E C L   DT+ CK+IL+E+AVK+N +KP Y T +  G 
Sbjct: 195 EQDVANLALES---ILKRVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPGL 251

Query: 324 PPIFVSSLIFNGKHYVAQGGMNKKESQQLVAR 229
            P+F+S+L+F+G  Y    G NKKE++QL AR
Sbjct: 252 LPVFISTLVFDGVSYTGDAGRNKKEAEQLAAR 283


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score =  135 bits (339), Expect = 2e-29
 Identities = 73/153 (47%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
 Frame = -3

Query: 681 PQQCSYKNHLQECAQKACIHLPSYNTINVGSQHAPKFRSLVVFNGEIYRSQNVFSHKKTA 502
           P+   YKN LQE  Q+  + LP Y T+N G  H PKFRS V+ +GE Y S N FSH+K A
Sbjct: 9   PEHLMYKNRLQEYTQRQSLQLPIYQTVNEGYPHDPKFRSTVLVDGEEYTSHNTFSHRKEA 68

Query: 501 EMDAARIALVSL-GCLRPRIREESCLLGQEDTILCKTILHEYAVKINVQKPMYITEMHGS 325
           E D A++AL S+   ++  I++E      EDT+ CK+IL+EYAVK+ ++ P Y T   G 
Sbjct: 69  EQDVAKLALTSITEKIKDEIKDEK--FTHEDTVACKSILNEYAVKMQLEMPTYNTVKQGG 126

Query: 324 P-PIFVSSLIFNGKHYVAQGGMNKKESQQLVAR 229
             PIFVSS +FNG  Y    G  KKE++QL AR
Sbjct: 127 LFPIFVSSSVFNGVTYNGDIGRTKKEAEQLAAR 159


>ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798730 [Glycine max]
          Length = 434

 Score =  117 bits (292), Expect = 5e-24
 Identities = 66/149 (44%), Positives = 91/149 (61%), Gaps = 3/149 (2%)
 Frame = -3

Query: 666 YKNHLQECAQKACIHLPSYNTINVGSQHAPKFRSLVVFNGEIYRSQNVFSHKKTAEMDAA 487
           YKN LQE   K+ I+ P Y TIN G  H+PKFRS V      Y SQ+ FSHKK AE +AA
Sbjct: 2   YKNRLQEFTSKSGINFPVYQTINEGQDHSPKFRSTVWVADMGYTSQSTFSHKKAAEHEAA 61

Query: 486 RIALVSLGCLRPRIREESCLLGQEDTILCKTILHEYAVKINVQKPMYIT---EMHGSPPI 316
           R+AL S   +  R R+E   L  + +   K+I++EYA K++V++P Y T   ++ G  PI
Sbjct: 62  RLALES---ILKRTRDEGLSLVNQISPFSKSIMNEYADKLHVEQPTYNTDQQQLGGVLPI 118

Query: 315 FVSSLIFNGKHYVAQGGMNKKESQQLVAR 229
           F++SL+FNG  Y       KKE++Q  A+
Sbjct: 119 FITSLVFNGTSYTGDPARTKKEAEQSAAK 147


>ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  115 bits (287), Expect = 2e-23
 Identities = 63/147 (42%), Positives = 94/147 (63%), Gaps = 1/147 (0%)
 Frame = -3

Query: 666 YKNHLQECAQKACIHLPSYNTINVGSQHAPKFRSLVVFNGEIYRSQNVFSHKKTAEMDAA 487
           YKNHL E  QKA I +P Y TI+ GS   PK+RS V+ +   Y S N F +++ AE DAA
Sbjct: 78  YKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDAA 137

Query: 486 RIALVSLGCLRPRIREESCLLGQEDTILCKTILHEYAVKINVQKPMYITEMH-GSPPIFV 310
           R+A   +     + ++++ LL +ED +LCK+IL EY  K+ +++P+Y T+ + GS   F 
Sbjct: 138 RVAFEYIS---KKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQ 194

Query: 309 SSLIFNGKHYVAQGGMNKKESQQLVAR 229
           S+L+F+G  Y +  G  KKE++QL AR
Sbjct: 195 STLVFDGVVYTSDLGRTKKEAEQLAAR 221


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