BLASTX nr result

ID: Angelica23_contig00031073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00031073
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632479.1| PREDICTED: putative uncharacterized protein ...   121   1e-25
emb|CBI33150.3| unnamed protein product [Vitis vinifera]              121   1e-25
ref|XP_004137287.1| PREDICTED: putative uncharacterized protein ...   108   6e-22
ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA h...   108   1e-21
ref|NP_567206.1| zinc finger-related and helicase and IBR domain...    82   7e-14

>ref|XP_003632479.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Vitis vinifera]
          Length = 1686

 Score =  121 bits (303), Expect = 1e-25
 Identities = 64/177 (36%), Positives = 98/177 (55%), Gaps = 11/177 (6%)
 Frame = -2

Query: 500 PMRNTNSGN----HHRYDRYSQQSPRGINQTTKPV-------SRANFVIQLRCDDKALKR 354
           P R  + GN      +++    + P    Q  +P        S  NF+I+LR      K+
Sbjct: 19  PRRAFSPGNIRSVRPQFEERGDEFPSNCRQNLRPEVAPPFHPSPPNFIIELRPGLGGFKK 78

Query: 353 DDVEELIEKLKCKTENFSVLDREFSVLSFFFKQWIDTLEAMVLFWKIRLDGTFLLVPKLI 174
            DV+EL+   K   E  +VL       + FF+QW+DTLE MV  W++RL+G  L  PKLI
Sbjct: 79  IDVDELLATCKLMPEKVTVLSSGPIAATLFFRQWVDTLETMVYLWELRLEGKHLFTPKLI 138

Query: 173 SNVYVPSDTEELNERLKSLFIERIKCLIDGDLVKKWQKKLREVVSEIIRINGVLAKP 3
            N+ +PSD +EL  RL++ F   I+ +++G+ VKKWQ +L+ +  EI ++ G+L KP
Sbjct: 139 RNIIMPSDEDELRSRLQTTFGNHIRAILEGEEVKKWQNELQHLSDEIAKVQGLLRKP 195


>emb|CBI33150.3| unnamed protein product [Vitis vinifera]
          Length = 1988

 Score =  121 bits (303), Expect = 1e-25
 Identities = 64/177 (36%), Positives = 98/177 (55%), Gaps = 11/177 (6%)
 Frame = -2

Query: 500 PMRNTNSGN----HHRYDRYSQQSPRGINQTTKPV-------SRANFVIQLRCDDKALKR 354
           P R  + GN      +++    + P    Q  +P        S  NF+I+LR      K+
Sbjct: 19  PRRAFSPGNIRSVRPQFEERGDEFPSNCRQNLRPEVAPPFHPSPPNFIIELRPGLGGFKK 78

Query: 353 DDVEELIEKLKCKTENFSVLDREFSVLSFFFKQWIDTLEAMVLFWKIRLDGTFLLVPKLI 174
            DV+EL+   K   E  +VL       + FF+QW+DTLE MV  W++RL+G  L  PKLI
Sbjct: 79  IDVDELLATCKLMPEKVTVLSSGPIAATLFFRQWVDTLETMVYLWELRLEGKHLFTPKLI 138

Query: 173 SNVYVPSDTEELNERLKSLFIERIKCLIDGDLVKKWQKKLREVVSEIIRINGVLAKP 3
            N+ +PSD +EL  RL++ F   I+ +++G+ VKKWQ +L+ +  EI ++ G+L KP
Sbjct: 139 RNIIMPSDEDELRSRLQTTFGNHIRAILEGEEVKKWQNELQHLSDEIAKVQGLLRKP 195


>ref|XP_004137287.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Cucumis sativus]
          Length = 1735

 Score =  108 bits (271), Expect = 6e-22
 Identities = 69/179 (38%), Positives = 98/179 (54%), Gaps = 1/179 (0%)
 Frame = -2

Query: 536 FTMIRDTGQRYAPMRNTNSGNHHRYDRYSQQSPRGINQTTKPVSRANFVIQLRCDDKALK 357
           F  IR +   Y P R+ N+ +        Q  P          +RANF I L  + + L 
Sbjct: 17  FRTIRPSNLHYLP-RSPNASDFPSKFSAQQNCP----------NRANFAIDLVLEHRTLS 65

Query: 356 RDDVEELIEKLKCKTENFSVLDREFSVLSF-FFKQWIDTLEAMVLFWKIRLDGTFLLVPK 180
           +  VE LI K   K +N+ ++ +  SV +F FFKQW+  LE MV  W++RL G     P 
Sbjct: 66  KCSVELLIAKCISKPDNY-IIPQVGSVAAFLFFKQWVSALEYMVALWELRLTGFHDFTPI 124

Query: 179 LISNVYVPSDTEELNERLKSLFIERIKCLIDGDLVKKWQKKLREVVSEIIRINGVLAKP 3
           L   + +PSD +EL+ERL++LF ERIK L+DGD V+ WQ K   V+ +I RI+  L +P
Sbjct: 125 LKPRINLPSDVDELHERLQNLFAERIKLLMDGDKVRHWQNKYDLVMVQINRISDTLRRP 183


>ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein
           [Medicago truncatula] gi|355490965|gb|AES72168.1|
           Pre-mRNA splicing factor ATP-dependent RNA helicase-like
           protein [Medicago truncatula]
          Length = 1718

 Score =  108 bits (269), Expect = 1e-21
 Identities = 60/158 (37%), Positives = 88/158 (55%)
 Frame = -2

Query: 476 NHHRYDRYSQQSPRGINQTTKPVSRANFVIQLRCDDKALKRDDVEELIEKLKCKTENFSV 297
           ++HR+DR  +++P        P    NF+++L    +AL RDDV+ LI K K   +N+  
Sbjct: 34  SNHRFDRPPERNP--------PHRPPNFILKLHLGRRALNRDDVDSLIGKCKPNPDNYCF 85

Query: 296 LDREFSVLSFFFKQWIDTLEAMVLFWKIRLDGTFLLVPKLISNVYVPSDTEELNERLKSL 117
              +    S  F QW D  +A+V FW+ R+ G     P+LISNV VPSDT EL   L+ +
Sbjct: 86  YPCDGVAASLNFLQWTDARDAVVWFWESRISGGHDFTPELISNVMVPSDTVELEGSLRRV 145

Query: 116 FIERIKCLIDGDLVKKWQKKLREVVSEIIRINGVLAKP 3
           F   +K L++G  VKKW ++   V  EI R+  +L KP
Sbjct: 146 FASHVKELMEGKEVKKWVEEWDRVSKEISRVVSLLGKP 183


>ref|NP_567206.1| zinc finger-related and helicase and IBR domain-containing protein
           [Arabidopsis thaliana]
           gi|290463373|sp|P0CE10.1|Y4102_ARATH RecName:
           Full=Putative uncharacterized protein At4g01020,
           chloroplastic; Flags: Precursor
           gi|332656567|gb|AEE81967.1| zinc finger-related and
           helicase and IBR domain-containing protein [Arabidopsis
           thaliana]
          Length = 1787

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 11/159 (6%)
 Frame = -2

Query: 512 QRYAPMRNTNSGNHHRYDRYSQQSPRGINQTTKPVSRA--NFVIQL------RCDDKALK 357
           Q+++   NTN   ++R DR            + PV+RA  NF++QL        D K  K
Sbjct: 49  QQHSQYHNTNFPPNYRRDRAPSSG------FSPPVTRARPNFIVQLLHPAAANSDTKLSK 102

Query: 356 RDDVEELIEKLKCKTENFSVLDREFSVL--SFFFKQWIDTLEAMVLFWKIRLDGTFLLVP 183
           + ++E +   L C+    SV   +F  +  SF F+QW+D   A+V  W  RL G    VP
Sbjct: 103 KQEIESIA--LLCEIPEESVHVPQFGCIAASFSFRQWVDARSAVVALWDYRLQGRHDFVP 160

Query: 182 KLISNVYVPSDTEELNERLKSLFIERIKCLID-GDLVKK 69
           +LI NV VPSD +EL +RL+ LF   +  L++ G  VKK
Sbjct: 161 ELIPNVVVPSDMDELKDRLRDLFSSHVLSLMENGQGVKK 199


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