BLASTX nr result

ID: Angelica23_contig00030993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030993
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2...   174   6e-42
emb|CBI30660.3| unnamed protein product [Vitis vinifera]              171   5e-41
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...   171   5e-41
emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]   170   1e-40
ref|XP_002522543.1| pentatricopeptide repeat-containing protein,...   164   1e-38

>ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  174 bits (442), Expect = 6e-42
 Identities = 88/145 (60%), Positives = 111/145 (76%)
 Frame = -1

Query: 453 FSSSTHFSQPIFQQNYTPPPIEINYLFNQSNTSTLSTALQHYINSDHPCHGQKVHSHILK 274
           FSS+ +++    + +   PP + +Y+ +Q+ T TLS+ALQHYINSD P HGQK+H+HILK
Sbjct: 14  FSSTCNYTS--LRPSNVFPPNQEDYITHQTPT-TLSSALQHYINSDTPFHGQKIHTHILK 70

Query: 273 TGFRPNTNISIKLLIVHIKSSCFLYARKVFDELPHPTLSAYNYLLSGYVKSGKISESFSL 94
           TGFRPN NISIKLLI+H+K  C  YA ++FDELP  TLSAYNY++ GY++ G   ES S+
Sbjct: 71  TGFRPNINISIKLLILHLKCRCLKYAHQLFDELPQRTLSAYNYMIGGYLRQGLFEESISM 130

Query: 93  VRRLCFSGECPDGFTFSMILKASTS 19
           VRRL   GE PDGFTFSMILKASTS
Sbjct: 131 VRRLDLDGERPDGFTFSMILKASTS 155


>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  171 bits (434), Expect = 5e-41
 Identities = 89/155 (57%), Positives = 111/155 (71%)
 Frame = -1

Query: 489 MKNAIIPRFKASFSSSTHFSQPIFQQNYTPPPIEINYLFNQSNTSTLSTALQHYINSDHP 310
           MK+      + S  SS+   +P    N + PP   +Y+ + +  S LS ALQHYINSD P
Sbjct: 1   MKHVKSSSIRPSIFSSSQNQRPSVPPNQSFPPAS-DYISSPTAIS-LSVALQHYINSDFP 58

Query: 309 CHGQKVHSHILKTGFRPNTNISIKLLIVHIKSSCFLYARKVFDELPHPTLSAYNYLLSGY 130
            HGQK+HSHILK GF PNTN+SIKLLI+H+KS C  YAR++FDE+  PTLSAYNY++SGY
Sbjct: 59  SHGQKIHSHILKIGFEPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAYNYMISGY 118

Query: 129 VKSGKISESFSLVRRLCFSGECPDGFTFSMILKAS 25
           +K G+I E  +LV RL FS E PDGFTFSMILKA+
Sbjct: 119 LKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKAT 153


>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score =  171 bits (434), Expect = 5e-41
 Identities = 89/155 (57%), Positives = 111/155 (71%)
 Frame = -1

Query: 489 MKNAIIPRFKASFSSSTHFSQPIFQQNYTPPPIEINYLFNQSNTSTLSTALQHYINSDHP 310
           MK+      + S  SS+   +P    N + PP   +Y+ + +  S LS ALQHYINSD P
Sbjct: 1   MKHVKSSSIRPSIFSSSQNQRPSVPPNQSFPPAS-DYISSPTAIS-LSVALQHYINSDFP 58

Query: 309 CHGQKVHSHILKTGFRPNTNISIKLLIVHIKSSCFLYARKVFDELPHPTLSAYNYLLSGY 130
            HGQK+HSHILK GF PNTN+SIKLLI+H+KS C  YAR++FDE+  PTLSAYNY++SGY
Sbjct: 59  SHGQKIHSHILKIGFEPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAYNYMISGY 118

Query: 129 VKSGKISESFSLVRRLCFSGECPDGFTFSMILKAS 25
           +K G+I E  +LV RL FS E PDGFTFSMILKA+
Sbjct: 119 LKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKAT 153


>emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]
          Length = 504

 Score =  170 bits (431), Expect = 1e-40
 Identities = 87/155 (56%), Positives = 108/155 (69%)
 Frame = -1

Query: 489 MKNAIIPRFKASFSSSTHFSQPIFQQNYTPPPIEINYLFNQSNTSTLSTALQHYINSDHP 310
           MK+      + S  SS+   +P    N + PP   +   +     +LS ALQHYINSD P
Sbjct: 1   MKHVKSXSIRPSIFSSSXNQRPXVPPNQSFPPA--SDXISSPTAISLSVALQHYINSDFP 58

Query: 309 CHGQKVHSHILKTGFRPNTNISIKLLIVHIKSSCFLYARKVFDELPHPTLSAYNYLLSGY 130
            HGQK+HSHILK GF PNTN+SIKLLI+H+KS C  YAR++FDE+  PTLSAYNY++SGY
Sbjct: 59  SHGQKIHSHILKIGFEPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAYNYMISGY 118

Query: 129 VKSGKISESFSLVRRLCFSGECPDGFTFSMILKAS 25
           +K G+I E  +LV RL FS E PDGFTFSMILKA+
Sbjct: 119 LKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKAT 153


>ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538234|gb|EEF39843.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score =  164 bits (414), Expect = 1e-38
 Identities = 88/157 (56%), Positives = 109/157 (69%)
 Frame = -1

Query: 489 MKNAIIPRFKASFSSSTHFSQPIFQQNYTPPPIEINYLFNQSNTSTLSTALQHYINSDHP 310
           MKNA          SST         N   PP E  YLF +S  + LS+ALQ +INS+ P
Sbjct: 1   MKNAKFCYVTPCMLSSTKTYTSHAHSNPILPPNE-EYLF-RSTAAALSSALQDHINSNTP 58

Query: 309 CHGQKVHSHILKTGFRPNTNISIKLLIVHIKSSCFLYARKVFDELPHPTLSAYNYLLSGY 130
            HGQK+H+HI+KTGF PNTN+SIKLLI+++K  C  YAR++FDELP  TLSAYNYL+ GY
Sbjct: 59  FHGQKIHAHIVKTGFIPNTNVSIKLLILYLKCGCLKYARQMFDELPQRTLSAYNYLIGGY 118

Query: 129 VKSGKISESFSLVRRLCFSGECPDGFTFSMILKASTS 19
           +K G + +S +LVRRL   G+ PDGFT+SMILKASTS
Sbjct: 119 LKLGLVQDSMNLVRRLVLEGQRPDGFTYSMILKASTS 155


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