BLASTX nr result

ID: Angelica23_contig00030950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030950
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   295   1e-77
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   290   3e-76
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   269   7e-70
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...   266   4e-69
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo...   261   2e-67

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  295 bits (755), Expect = 1e-77
 Identities = 149/331 (45%), Positives = 206/331 (62%), Gaps = 8/331 (2%)
 Frame = +3

Query: 6    IANRAPIITRLFFADDSYLFFRATTEEAHCVKDCLLLYERASGQQVNFNKSCIQFSRNTH 185
            +A  A  +  LFFADD YLFF+AT  E+  +K  LL Y+  SGQ++N NKS + FSRNT 
Sbjct: 137  VARGASTVLHLFFADDLYLFFKATESESRSLKQILLRYQNLSGQEINLNKSALTFSRNTD 196

Query: 186  TSVSASISQVLRVNIQSDTSFYLGLPNFVSRNKREVFNYVKDKVWNRFQSWKGKVISRGG 365
              V   I  +L+V   +D   YLG+P  V +NKR++F +V+ KVWNR Q+W G+ +SR G
Sbjct: 197  DVVKRGICSILQVEEXADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAG 256

Query: 366  KEVLLKSVIQSIPSYVMSVFLLPKTLCDEIKTLMNKFWLVSNVENRGGIRWMSWERLSVP 545
            KE+ LK+V QSIP+YVM + LLPK LC +I+++MN F+  SN + R  IRWMSW ++   
Sbjct: 257  KEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNGFFWDSNPQCR-SIRWMSWGKMCKQ 315

Query: 546  KKFGGMGFRRIREFNLAMLGKQAWRLMVDPNLFTAKLLQARYFPGKSFREAGIGSNPSFV 725
            KK GG+GFR++ +FNLA+L KQ WR + +P+    ++ QARYF   SF  A +GSNPS++
Sbjct: 316  KKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYM 375

Query: 726  WRNIMEAKNLVCDGSILKVGTGVNINIWRDPWIPDISNPRVST--------IAPQELIDE 881
            WR+I+ A+ L+  G    + +G  + +W D W+PD SN  + T        I   ELI E
Sbjct: 376  WRSILAAQGLLKRGCYWSIASGTKVQVWGDSWLPDSSNRLIITPPVAGFDGIKVDELITE 435

Query: 882  SVSSIFKNNAREWDVDVIRDIFNERDACKIL 974
             +          W  D IRD F  RDA  IL
Sbjct: 436  GL----------WREDFIRDKFMARDADLIL 456


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  290 bits (743), Expect = 3e-76
 Identities = 143/323 (44%), Positives = 204/323 (63%)
 Frame = +3

Query: 6    IANRAPIITRLFFADDSYLFFRATTEEAHCVKDCLLLYERASGQQVNFNKSCIQFSRNTH 185
            +A  AP ++ LFFAD+SYLFF+AT  E+  +K  LL Y+  SGQ++N NK  + FSRNT 
Sbjct: 1224 VARGAPXVSHLFFADBSYLFFKATESESRSLKQILLRYQNLSGQEINLNKXALTFSRNTD 1283

Query: 186  TSVSASISQVLRVNIQSDTSFYLGLPNFVSRNKREVFNYVKDKVWNRFQSWKGKVISRGG 365
              V   I  +L+V  Q+D   YLG+P  V +NKR++F +V+ KVWNR Q+W G+ +SR G
Sbjct: 1284 DVVKRGICSILQVEEQADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAG 1343

Query: 366  KEVLLKSVIQSIPSYVMSVFLLPKTLCDEIKTLMNKFWLVSNVENRGGIRWMSWERLSVP 545
            KE+ LK+V QSIP+YVM + LLPK LC +I+++MN F+  SN + R  IRWMSW ++   
Sbjct: 1344 KEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNXFFWDSNPQXR-SIRWMSWXKMCKQ 1402

Query: 546  KKFGGMGFRRIREFNLAMLGKQAWRLMVDPNLFTAKLLQARYFPGKSFREAGIGSNPSFV 725
            KK GG+GFR++ +FNLA+L KQ  R + + +     + QARYF   SF  A +GSNPS++
Sbjct: 1403 KKDGGLGFRKLEDFNLALLAKQGXRFLQNLDSLVTIIFQARYFRNSSFLNAELGSNPSYM 1462

Query: 726  WRNIMEAKNLVCDGSILKVGTGVNINIWRDPWIPDISNPRVSTIAPQELIDESVSSIFKN 905
            WR+I+ A++L+  G    + +G  + +W D W+P+ SN  + T    +     V  +   
Sbjct: 1463 WRSILAAQDLLKMGCYWSIASGTKVQVWGDSWLPNSSNRLIITPHVADFDGIKVDELITK 1522

Query: 906  NAREWDVDVIRDIFNERDACKIL 974
                W  D IRD F  RDA  IL
Sbjct: 1523 GL--WHEDFIRDKFMGRDADLIL 1543


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 653

 Score =  269 bits (688), Expect = 7e-70
 Identities = 137/325 (42%), Positives = 197/325 (60%)
 Frame = +3

Query: 3    KIANRAPIITRLFFADDSYLFFRATTEEAHCVKDCLLLYERASGQQVNFNKSCIQFSRNT 182
            K+  RAP ++ L FADDS+LFFRA   E   +KD L  Y  AS Q +N  KS I FSRN 
Sbjct: 260  KVCKRAPTVSHLLFADDSFLFFRANENETRALKDILDTYANASDQLINMQKSEIYFSRNV 319

Query: 183  HTSVSASISQVLRVNIQSDTSFYLGLPNFVSRNKREVFNYVKDKVWNRFQSWKGKVISRG 362
              +   ++S +L V+       YLGLP+ + R+K+ +FNY+KD++WNR      K++S+ 
Sbjct: 320  PVTKKNTLSNMLWVSEGIGIRKYLGLPSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQA 379

Query: 363  GKEVLLKSVIQSIPSYVMSVFLLPKTLCDEIKTLMNKFWLVSNVENRGGIRWMSWERLSV 542
            GKEVL+KSV Q+IPSY MSVFLLP ++ D+I+ ++N FW     E RGGIRWMSWERL++
Sbjct: 380  GKEVLIKSVAQAIPSYCMSVFLLPHSIADDIEKMLNSFWWGMKNEGRGGIRWMSWERLTM 439

Query: 543  PKKFGGMGFRRIREFNLAMLGKQAWRLMVDPNLFTAKLLQARYFPGKSFREAGIGSNPSF 722
             K++GGMGFR I  F+LAM GKQ W  + +P+   +++ +A+YF  ++F  A +G NPS+
Sbjct: 440  RKEWGGMGFRHIHGFDLAMSGKQCWNFLTNPDAMVSRIFKAKYFTNENFLGASLGHNPSY 499

Query: 723  VWRNIMEAKNLVCDGSILKVGTGVNINIWRDPWIPDISNPRVSTIAPQELIDESVSSIFK 902
            VWR+I  ++  +  G   ++G G                   ST A       +VS +  
Sbjct: 500  VWRSIWSSRIFLKTGYQWRIGDG-------------------STTA-------TVSHLID 533

Query: 903  NNAREWDVDVIRDIFNERDACKILQ 977
               R W+  +IR+ FN RD  +IL+
Sbjct: 534  AQTRSWNEPLIRNNFNLRDVDEILK 558


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
            gi|241922442|gb|EER95586.1| hypothetical protein
            SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score =  266 bits (681), Expect = 4e-69
 Identities = 128/324 (39%), Positives = 204/324 (62%)
 Frame = +3

Query: 3    KIANRAPIITRLFFADDSYLFFRATTEEAHCVKDCLLLYERASGQQVNFNKSCIQFSRNT 182
            KI   AP +  LFFADDS +  RA  E+AH +K  L +YERASGQ +N +KS I FS NT
Sbjct: 92   KICRGAPRVNHLFFADDSLMLMRARKEDAHELKHILEIYERASGQVINKDKSSIMFSPNT 151

Query: 183  HTSVSASISQVLRVNIQSDTSFYLGLPNFVSRNKREVFNYVKDKVWNRFQSWKGKVISRG 362
                   + + L +  ++ +  YLG P    +++++ F Y+K ++W R Q W+ K++S+ 
Sbjct: 152  SDYFKGKMRKELSIMQEARSEKYLGGPISTGKSRKKAFEYIKQRIWARIQGWQEKLLSKA 211

Query: 363  GKEVLLKSVIQSIPSYVMSVFLLPKTLCDEIKTLMNKFWLVSNVENRGGIRWMSWERLSV 542
            GKE+L+K+V Q+IP+Y MS F L K+ CD++ +++ ++W  S  +    I W+SWE+L++
Sbjct: 212  GKEILIKAVAQAIPTYAMSYFNLTKSFCDDLSSMVGRYWW-SEQDKTNKIHWLSWEKLTL 270

Query: 543  PKKFGGMGFRRIREFNLAMLGKQAWRLMVDPNLFTAKLLQARYFPGKSFREAGIGSNPSF 722
             KK GG+GFR +  FNLAML +QAWR++++P+    ++L+ARYFP  +  +    +   +
Sbjct: 271  SKKRGGLGFRDLYHFNLAMLARQAWRILIEPDTLCGRVLKARYFPNSNILQCKARAGILY 330

Query: 723  VWRNIMEAKNLVCDGSILKVGTGVNINIWRDPWIPDISNPRVSTIAPQELIDESVSSIFK 902
             WR+I++  NL+ +G I ++G+G N+NIW DPWIP  +  +  T   + LI + VS +  
Sbjct: 331  TWRSIIDGINLLKEGIIWRIGSGSNVNIWTDPWIPRGTTRKPITPRGRYLITK-VSDLIN 389

Query: 903  NNAREWDVDVIRDIFNERDACKIL 974
             +   WD ++I D+F   DA  IL
Sbjct: 390  PSTGTWDENLISDVFWPEDAEAIL 413


>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
          Length = 697

 Score =  261 bits (667), Expect = 2e-67
 Identities = 130/320 (40%), Positives = 194/320 (60%)
 Frame = +3

Query: 3    KIANRAPIITRLFFADDSYLFFRATTEEAHCVKDCLLLYERASGQQVNFNKSCIQFSRNT 182
            +I   API+T LFFADDS L  +AT   A+ +K  +L YER SGQ VN +KS + FS N 
Sbjct: 189  RICRGAPILTHLFFADDSLLLLKATESVANEMKQIILDYERCSGQIVNRDKSVVMFSSNM 248

Query: 183  HTSVSASISQVLRVNIQSDTSFYLGLPNFVSRNKREVFNYVKDKVWNRFQSWKGKVISRG 362
                    S  L +N  +    YLGLP F+ R+K + F Y+K+K+W   Q WK K +S+ 
Sbjct: 249  DEEEKKVFSHTLGINCIAHNDRYLGLPVFIGRSKAKTFEYLKEKIWRCIQGWKEKFLSKA 308

Query: 363  GKEVLLKSVIQSIPSYVMSVFLLPKTLCDEIKTLMNKFWLVSNVENRGGIRWMSWERLSV 542
            GKE+L+K+V Q+IP+Y MS F L K+LCDE+ +++ +FW   + +N   I W+  +++  
Sbjct: 309  GKEILIKAVAQAIPTYAMSCFYLTKSLCDELTSMILRFWWAQH-DNDKKIHWLGKDKIMK 367

Query: 543  PKKFGGMGFRRIREFNLAMLGKQAWRLMVDPNLFTAKLLQARYFPGKSFREAGIGSNPSF 722
            PK  GG+GFR +  FN+AML +Q WRL+ +P+   ++LL+A+YFP  +  +A      S+
Sbjct: 368  PKSQGGLGFRDLHSFNIAMLARQGWRLIQNPDSLCSRLLKAKYFPNCNVLDAQSRKQMSY 427

Query: 723  VWRNIMEAKNLVCDGSILKVGTGVNINIWRDPWIPDISNPRVSTIAPQELIDESVSSIFK 902
             WR+I++   L+  G I +VG G +INIW DPW+P   + R  T      +   V  +  
Sbjct: 428  SWRSILKGIQLLRKGVIWRVGNGEHINIWSDPWLP--RDMRFVTTRRGASLITRVCELID 485

Query: 903  NNAREWDVDVIRDIFNERDA 962
                +WD+++I+ IFNE DA
Sbjct: 486  PTTGQWDIELIQQIFNENDA 505


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